1. SpecSpec

    1. Spec AbndmAlgoPattern

  2. ClassClass

    1. Class Accumulator

  3. SpecSpec

    1. Spec AdaptorIterator

  4. fn()fn()

    1. fn() addToProfile

  5. SpecSpec

    1. Spec AdjacencyIterator

  6. ClassClass

    1. Class AFScore

  7. ConceptConcept

    1. Concept AggregateConcept

  8. GroupGroup

    1. Group AggregateTags

  9. SpecSpec

    1. Spec AhoCorasickPattern

  10. ClassClass

    1. Class Align

  11. SpecSpec

    1. Spec AlignColIterator

  12. ClassClass

    1. Class AlignCols

  13. ClassClass

    1. Class AlignConfig

  14. ClassClass

    1. Class AlignedReadLayout

  15. ClassClass

    1. Class AlignedReadStoreElement

  16. GroupGroup

    1. Group AlignmentAlgorithmTags

  17. fn()fn()

    1. fn() alignmentEvaluation

  18. fn()fn()

    1. fn() alignmentFreeComparison

  19. SpecSpec

    1. Spec AlignmentGraph

  20. GroupGroup

    1. Group AlignmentGraphCombinationTags

  21. GroupGroup

    1. Group AlignmentGraphFormatTags

  22. ClassClass

    1. Class AlignmentStats

  23. ClassClass

    1. Class AlignQualityStoreElement

  24. ClassClass

    1. Class AlignTraceback

  25. ClassClass

    1. Class Allocator

  26. GroupGroup

    1. Group AllocatorUsageTags

  27. SpecSpec

    1. Spec AllocString

  28. Fn<>Fn<>

    1. Fn<> AllowsFastRandomAccess

  29. fn()fn()

    1. fn() allPairsShortestPath

  30. ConceptConcept

    1. Concept AlphabetConcept

  31. ClassClass

    1. Class AlphabetExpansion

  32. ConceptConcept

    1. Concept AlphabetWithGapsConcept

  33. ConceptConcept

    1. Concept AlphabetWithQualitiesConcept

  34. ConceptConcept

    1. Concept AlphabetWithUnknownValueConcept

  35. SpecSpec

    1. Spec AminoAcid

  36. SpecSpec

    1. Spec AnchorGaps

  37. ClassClass

    1. Class AnnotationStoreElement

  38. SpecSpec

    1. Spec AnnotationTreeIterator

  39. GroupGroup

    1. Group ApproximateFinderSearchTypeTags

  40. ClassClass

    1. Class ArgParseArgument

  41. enumenum

    1. enum ArgParseArgument::ArgumentType

  42. SpecSpec

    1. Spec ArgParseOption

  43. ClassClass

    1. Class ArgumentParser

  44. enumenum

    1. enum ArgumentParser::ParseResult

  45. fn()fn()

    1. fn() arrayClearSpace

  46. fn()fn()

    1. fn() arrayConstruct

  47. fn()fn()

    1. fn() arrayConstructCopy

  48. fn()fn()

    1. fn() arrayConstructMove

  49. fn()fn()

    1. fn() arrayCopy

  50. fn()fn()

    1. fn() arrayCopyBackward

  51. fn()fn()

    1. fn() arrayCopyForward

  52. fn()fn()

    1. fn() arrayDestruct

  53. fn()fn()

    1. fn() arrayFill

  54. SpecSpec

    1. Spec ArrayGaps

  55. fn()fn()

    1. fn() arrayMove

  56. fn()fn()

    1. fn() arrayMoveBackward

  57. fn()fn()

    1. fn() arrayMoveForward

  58. SpecSpec

    1. Spec ArrayString

  59. GroupGroup

    1. Group AssertMacros

  60. ConceptConcept

    1. Concept AssignableConcept

  61. fn()fn()

    1. fn() assignQualities

  62. fn()fn()

    1. fn() assignTagsBamToSam

  63. fn()fn()

    1. fn() assignTagsSamToBam

  64. SpecSpec

    1. Spec AsyncFile

  65. ClassClass

    1. Class AsyncRequest

  66. fn()fn()

    1. fn() atomicMax

  67. fn()fn()

    1. fn() atomicMin

  68. GroupGroup

    1. Group AtomicPrimitives

  69. SpecSpec

    1. Spec Automaton

  70. SpecSpec

    1. Spec AutoSeqFormat

  71. SpecSpec

    1. Spec AverageAccumulator

  72. ClassClass

    1. Class BadAlloc

  73. ClassClass

    1. Class BadCast

  74. SpecSpec

    1. Spec BadLexicalCast

  75. SpecSpec

    1. Spec BaiBamIndex

  76. varvar

    1. var BAM_FLAG_SUPPLEMENTARY = 0x0800

  77. ClassClass

    1. Class BamAlignmentRecord

  78. SpecSpec

    1. Spec BamFileIn

  79. SpecSpec

    1. Spec BamFileOut

  80. enumenum

    1. enum BamFlags

  81. ClassClass

    1. Class BamHeader

  82. ClassClass

    1. Class BamHeaderRecord

  83. enumenum

    1. enum BamHeaderRecordType

  84. ClassClass

    1. Class BamIndex

  85. ClassClass

    1. Class BamIOContext

  86. GroupGroup

    1. Group BamIOContextMemberTag

  87. enumenum

    1. enum BamSortOrder

  88. ClassClass

    1. Class BamTagsDict

  89. fn()fn()

    1. fn() bandedChainAlignment

  90. SpecSpec

    1. Spec BandedLocalAlignmentEnumerator

  91. Fn<>Fn<>

    1. Fn<> BasicStream

  92. SpecSpec

    1. Spec Bed12Record

  93. SpecSpec

    1. Spec Bed3Record

  94. SpecSpec

    1. Spec Bed4Record

  95. SpecSpec

    1. Spec Bed5Record

  96. SpecSpec

    1. Spec Bed6Record

  97. SpecSpec

    1. Spec BedFileIn

  98. SpecSpec

    1. Spec BedFileOut

  99. ClassClass

    1. Class BedRecord

  100. ClassClass

    1. Class BedRgb

  101. fn()fn()

    1. fn() bellmanFordAlgorithm

  102. ClassClass

    1. Class BetaDistribution

  103. SpecSpec

    1. Spec BfamPattern

  104. SpecSpec

    1. Spec BfsIterator

  105. ConceptConcept

    1. Concept BidirectionalIteratorConcept

  106. ConceptConcept

    1. Concept BidirectionalStreamConcept

  107. SpecSpec

    1. Spec BitPackedPair

  108. SpecSpec

    1. Spec BitPackedTuple

  109. fn()fn()

    1. fn() bitScanForward

  110. fn()fn()

    1. fn() bitScanReverse

  111. ClassClass

    1. Class BlastIOContext

  112. ClassClass

    1. Class BlastMatch

  113. ClassClass

    1. Class BlastMatchField

  114. enumenum

    1. enum BlastMatchField::Enum

  115. enumenum

    1. enum BlastProgram

  116. ClassClass

    1. Class BlastProgramSelector

  117. ClassClass

    1. Class BlastRecord

  118. ClassClass

    1. Class BlastReport

  119. SpecSpec

    1. Spec BlastReportFileOut

  120. ClassClass

    1. Class BlastScoringScheme

  121. ClassClass

    1. Class BlastTabular

  122. SpecSpec

    1. Spec BlastTabularFileIn

  123. SpecSpec

    1. Spec BlastTabularFileOut

  124. ClassClass

    1. Class BlastTabularLL

  125. enumenum

    1. enum BlastTabularSpec

  126. ClassClass

    1. Class BlastTabularSpecSelector

  127. SpecSpec

    1. Spec BlockString

  128. typedeftypedef

    1. typedef Blosum30

  129. typedeftypedef

    1. typedef Blosum45

  130. typedeftypedef

    1. typedef Blosum62

  131. typedeftypedef

    1. typedef Blosum80

  132. SpecSpec

    1. Spec BndmAlgoPattern

  133. GroupGroup

    1. Group BottomUp

  134. SpecSpec

    1. Spec BottomUpIterator

  135. fn()fn()

    1. fn() breadthFirstSearch

  136. ClassClass

    1. Class BufferedStream

  137. fn()fn()

    1. fn() buildAlignmentGraph

  138. fn()fn()

    1. fn() bundle2

  139. ClassClass

    1. Class Bundle2

  140. fn()fn()

    1. fn() bundle3

  141. ClassClass

    1. Class Bundle3

  142. fn()fn()

    1. fn() bundle5

  143. ClassClass

    1. Class Bundle5

  144. Fn<>Fn<>

    1. Fn<> BytesPerValue

  145. fn()fn()

    1. fn() calcBetaDistParam

  146. fn()fn()

    1. fn() calcLogNormalDistParam

  147. fn()fn()

    1. fn() calculateCovariance

  148. fn()fn()

    1. fn() calculateOverlapIndicator

  149. fn()fn()

    1. fn() calculatePeriodicity

  150. fn()fn()

    1. fn() calculateProbability

  151. fn()fn()

    1. fn() calculateVariance

  152. Fn<>Fn<>

    1. Fn<> Cargo

  153. SpecSpec

    1. Spec Caster

  154. SpecSpec

    1. Spec ChainedSeed

  155. fn()fn()

    1. fn() chainSeedsGlobally

  156. typedeftypedef

    1. typedef CharIterator

  157. typedeftypedef

    1. typedef CharString

  158. Fn<>Fn<>

    1. Fn<> Chunk

  159. ClassClass

    1. Class CigarElement

  160. fn()fn()

    1. fn() clearAllBits

  161. fn()fn()

    1. fn() clearBit

  162. ConceptConcept

    1. Concept ComparableConcept

  163. Fn<>Fn<>

    1. Fn<> Comparator

  164. Fn<>Fn<>

    1. Fn<> CompareType

  165. Fn<>Fn<>

    1. Fn<> CompareTypeImpl

  166. fn()fn()

    1. fn() complement

  167. ClassClass

    1. Class CompressedSA

  168. GroupGroup

    1. Group CompressedSAFibres

  169. fn()fn()

    1. fn() computeAlignmentStats

  170. fn()fn()

    1. fn() computeSplitters

  171. SpecSpec

    1. Spec ConcatDirectStringSet

  172. ClassClass

    1. Class ConcatenatorManyToOne

  173. SpecSpec

    1. Spec ConcatVirtualIterator

  174. GroupGroup

    1. Group ConceptChecking

  175. ClassClass

    1. Class ConcurrentQueue

  176. SpecSpec

    1. Spec ConcurrentSuspendableQueue

  177. fn()fn()

    1. fn() connectedComponents

  178. ClassClass

    1. Class ConsensusAlignerIllegalArgumentException

  179. fn()fn()

    1. fn() consensusAlignment

  180. ClassClass

    1. Class ConsensusAlignmentOptions

  181. ClassClass

    1. Class ConsensusScoreSequenceEntry

  182. ConceptConcept

    1. Concept ContainerConcept

  183. GroupGroup

    1. Group ContainerIteratorTags

  184. ClassClass

    1. Class ContainerView

  185. ClassClass

    1. Class ContigFile

  186. ClassClass

    1. Class ContigStoreElement

  187. fn()fn()

    1. fn() convert

  188. Fn<>Fn<>

    1. Fn<> Convert

  189. ConceptConcept

    1. Concept ConvertibleConcept

  190. fn()fn()

    1. fn() convertImpl

  191. fn()fn()

    1. fn() convertQuality

  192. ConceptConcept

    1. Concept CopyConstructibleConcept

  193. SpecSpec

    1. Spec Counter

  194. SpecSpec

    1. Spec CountingIdManager

  195. fn()fn()

    1. fn() countKmers

  196. fn()fn()

    1. fn() cpuTime

  197. fn()fn()

    1. fn() createBWTable

  198. fn()fn()

    1. fn() createInvSuffixArray

  199. fn()fn()

    1. fn() createLcpTable

  200. fn()fn()

    1. fn() createSuffixArray

  201. SpecSpec

    1. Spec CStyleString

  202. fn()fn()

    1. fn() cutNs

  203. ClassClass

    1. Class CyclicShape

  204. SpecSpec

    1. Spec D2AFScore

  205. SpecSpec

    1. Spec D2StarAFScore

  206. SpecSpec

    1. Spec D2zAFScore

  207. fn()fn()

    1. fn() dagShortestPath

  208. Fn<>Fn<>

    1. Fn<> DeepestSpec

  209. TagTag

    1. Tag Default

  210. ConceptConcept

    1. Concept DefaultConstructibleConcept

  211. Fn<>Fn<>

    1. Fn<> DefaultFindBeginPatternSpec

  212. Fn<>Fn<>

    1. Fn<> DefaultFinder

  213. ClassClass

    1. Class DefaultJstConfig

  214. Fn<>Fn<>

    1. Fn<> DefaultOverflowExplicit

  215. Fn<>Fn<>

    1. Fn<> DefaultOverflowImplicit

  216. Fn<>Fn<>

    1. Fn<> DefaultPattern

  217. Fn<>Fn<>

    1. Fn<> DefaultPrefixOrder

  218. fn()fn()

    1. fn() defaultRng

  219. ClassClass

    1. Class DefaultSeedConfig

  220. ClassClass

    1. Class DeltaMap

  221. SpecSpec

    1. Spec DeltaMapIterator

  222. enumenum

    1. enum DeltaType

  223. GroupGroup

    1. Group DeltaTypeTags

  224. SpecSpec

    1. Spec DependentStringSet

  225. fn()fn()

    1. fn() depthFirstSearch

  226. ClassClass

    1. Class Deque

  227. ConceptConcept

    1. Concept DestructibleConcept

  228. Fn<>Fn<>

    1. Fn<> Device

  229. GroupGroup

    1. Group DfiIndexFibres

  230. GroupGroup

    1. Group DfsOrder

  231. SpecSpec

    1. Spec DfsPreorderIterator

  232. Fn<>Fn<>

    1. Fn<> Difference

  233. fn()fn()

    1. fn() dijkstra

  234. SpecSpec

    1. Spec DirectedGraph

  235. GroupGroup

    1. Group DirectionTags

  236. GroupGroup

    1. Group DistanceCalculationTags

  237. SpecSpec

    1. Spec Dna

  238. SpecSpec

    1. Spec Dna5

  239. typedeftypedef

    1. typedef Dna5Iterator

  240. SpecSpec

    1. Spec Dna5Q

  241. typedeftypedef

    1. typedef Dna5QString

  242. typedeftypedef

    1. typedef Dna5String

  243. typedeftypedef

    1. typedef Dna5StringComplement

  244. typedeftypedef

    1. typedef Dna5StringReverse

  245. typedeftypedef

    1. typedef Dna5StringReverseComplement

  246. typedeftypedef

    1. typedef DnaIterator

  247. SpecSpec

    1. Spec DnaQ

  248. typedeftypedef

    1. typedef DnaQString

  249. typedeftypedef

    1. typedef DnaString

  250. typedeftypedef

    1. typedef DnaStringComplement

  251. typedeftypedef

    1. typedef DnaStringReverse

  252. typedeftypedef

    1. typedef DnaStringReverseComplement

  253. TagTag

    1. Tag DotDrawing

  254. typedeftypedef

    1. typedef DPBand

  255. ClassClass

    1. Class DPBandConfig

  256. GroupGroup

    1. Group DPBandSwitch

  257. SpecSpec

    1. Spec DPSearchPattern

  258. SpecSpec

    1. Spec Echoer

  259. SpecSpec

    1. Spec EdgeIterator

  260. ClassClass

    1. Class EdgeStump

  261. TagTag

    1. Tag EditDistance

  262. SpecSpec

    1. Spec EditDistanceScore

  263. typedeftypedef

    1. typedef EditDistanceScoreTypedef

  264. SpecSpec

    1. Spec EditEnvironment

  265. SpecSpec

    1. Spec EmptyFieldError

  266. GroupGroup

    1. Group EnableIfFunctionality

  267. fn()fn()

    1. fn() endsWith

  268. ConceptConcept

    1. Concept EqualityComparableConcept

  269. SpecSpec

    1. Spec Equidistant

  270. SpecSpec

    1. Spec ExactFragment

  271. SpecSpec

    1. Spec ExactReversableFragment

  272. ClassClass

    1. Class Exception

  273. GroupGroup

    1. Group ExceptionHandling

  274. fn()fn()

    1. fn() expectation

  275. fn()fn()

    1. fn() extendAlignment

  276. enumenum

    1. enum ExtensionDirection

  277. ClassClass

    1. Class ExternalConfig

  278. ClassClass

    1. Class ExternalConfigLarge

  279. ClassClass

    1. Class ExternalConfigSize

  280. SpecSpec

    1. Spec ExternalString

  281. ClassClass

    1. Class FaiIndex

  282. Fn<>Fn<>

    1. Fn<> Fibre

  283. ClassClass

    1. Class File

  284. GroupGroup

    1. Group FileCompressionTags

  285. Fn<>Fn<>

    1. Fn<> FileExtensions

  286. GroupGroup

    1. Group FileFormats

  287. ClassClass

    1. Class FileMapping

  288. enumenum

    1. enum FileMappingAdvise

  289. enumenum

    1. enum FileMappingMode

  290. enumenum

    1. enum FileOpenMode

  291. SpecSpec

    1. Spec Filter

  292. Fn<>Fn<>

    1. Fn<> Find

  293. ClassClass

    1. Class Finder

  294. fn()fn()

    1. fn() findRepeats

  295. SpecSpec

    1. Spec Finite

  296. ConceptConcept

    1. Concept FiniteOrderedAlphabetConcept

  297. SpecSpec

    1. Spec FixedCyclicShape

  298. fn()fn()

    1. fn() floydWarshallAlgorithm

  299. SpecSpec

    1. Spec FMIndex

  300. GroupGroup

    1. Group FMIndexCompressionSpec

  301. ClassClass

    1. Class FMIndexConfig

  302. GroupGroup

    1. Group FMIndexFibres

  303. GroupGroup

    1. Group FMIndexRankDictionarySpec

  304. fn()fn()

    1. fn() fordFulkersonAlgorithm

  305. ClassClass

    1. Class FormattedFile

  306. ConceptConcept

    1. Concept FormattedFileHeaderConcept

  307. SpecSpec

    1. Spec FormattedFileIn

  308. SpecSpec

    1. Spec FormattedFileOut

  309. ConceptConcept

    1. Concept FormattedFileRecordConcept

  310. ClassClass

    1. Class FormattedNumber

  311. ConceptConcept

    1. Concept ForwardContainerConcept

  312. ConceptConcept

    1. Concept ForwardIteratorConcept

  313. ClassClass

    1. Class Fragment

  314. ClassClass

    1. Class FragmentStore

  315. enumenum

    1. enum FragmentStore::PredefinedAnnotationTypes

  316. ClassClass

    1. Class FunctorComplement

  317. ClassClass

    1. Class FunctorConvert

  318. ClassClass

    1. Class FunctorLowcase

  319. ClassClass

    1. Class FunctorUpcase

  320. ClassClass

    1. Class GapAnchor

  321. GroupGroup

    1. Group GapDirectionTags

  322. SpecSpec

    1. Spec GappedShape

  323. Fn<>Fn<>

    1. Fn<> GappedValueType

  324. ClassClass

    1. Class Gaps

  325. ClassClass

    1. Class GapsIterator

  326. GroupGroup

    1. Group GapsSpecTag

  327. SpecSpec

    1. Spec GenericCyclicShape

  328. SpecSpec

    1. Spec GenericShape

  329. SpecSpec

    1. Spec GenerousDependentStringSet

  330. TagTag

    1. Tag GeneticCode

  331. enumenum

    1. enum GeneticCodeSpec

  332. ClassClass

    1. Class GenomicRegion

  333. fn()fn()

    1. fn() getAbsolutePath

  334. fn()fn()

    1. fn() getBamTypeChar

  335. fn()fn()

    1. fn() getBamTypeSize

  336. Fn<>Fn<>

    1. Fn<> GetDefaultRng

  337. fn()fn()

    1. fn() getTerminalSize

  338. Fn<>Fn<>

    1. Fn<> GetValue

  339. SpecSpec

    1. Spec GffFileIn

  340. SpecSpec

    1. Spec GffFileOut

  341. ClassClass

    1. Class GffRecord

  342. SpecSpec

    1. Spec GlobalAlign

  343. fn()fn()

    1. fn() globalAlignment

  344. fn()fn()

    1. fn() globalAlignmentScore

  345. SpecSpec

    1. Spec GlobalChain

  346. GroupGroup

    1. Group GlobalChainingTags

  347. fn()fn()

    1. fn() globalMsaAlignment

  348. ClassClass

    1. Class Graph

  349. GroupGroup

    1. Group GraphIteratorTags

  350. ConceptConcept

    1. Concept GraphOverAlphabetConcept

  351. fn()fn()

    1. fn() guessFormatFromFilename

  352. TagTag

    1. Tag HammingDistance

  353. SpecSpec

    1. Spec HammingSimplePattern

  354. SpecSpec

    1. Spec HammingStringEnumerator

  355. SpecSpec

    1. Spec HardwiredShape

  356. Fn<>Fn<>

    1. Fn<> HasMoveConstructor

  357. fn()fn()

    1. fn() heaviestIncreasingSubsequence

  358. SpecSpec

    1. Spec HierarchicalPexPattern

  359. GroupGroup

    1. Group HmmAlgorithms

  360. SpecSpec

    1. Spec HmmGraph

  361. ClassClass

    1. Class Holder

  362. SpecSpec

    1. Spec HorspoolPattern

  363. ConceptConcept

    1. Concept HostedConcept

  364. Fn<>Fn<>

    1. Fn<> Id

  365. ClassClass

    1. Class IdManager

  366. fn()fn()

    1. fn() ignoreUnusedVariableWarning

  367. ClassClass

    1. Class Index

  368. SpecSpec

    1. Spec IndexDfi

  369. SpecSpec

    1. Spec IndexEsa

  370. GroupGroup

    1. Group IndexEsaFibres

  371. GroupGroup

    1. Group IndexFindAlgorithm

  372. SpecSpec

    1. Spec IndexQGram

  373. SpecSpec

    1. Spec IndexSa

  374. SpecSpec

    1. Spec IndexWotd

  375. SpecSpec

    1. Spec InfixSegment

  376. ConceptConcept

    1. Concept InputIteratorConcept

  377. ConceptConcept

    1. Concept InputStreamConcept

  378. SpecSpec

    1. Spec InputStreamIterator

  379. ConceptConcept

    1. Concept IntegerConcept

  380. Fn<>Fn<>

    1. Fn<> IntegralForValue

  381. fn()fn()

    1. fn() integrateAlign

  382. ClassClass

    1. Class InternalPointerPropertyMap

  383. ClassClass

    1. Class InternalPropertyMap

  384. ClassClass

    1. Class IntervalAndCargo

  385. ClassClass

    1. Class IntervalTree

  386. ClassClass

    1. Class IntervalTreeNode

  387. GroupGroup

    1. Group IntervalTreeNodeTypeTags

  388. ClassClass

    1. Class IOError

  389. Fn<>Fn<>

    1. Fn<> IosOpenMode

  390. Fn<>Fn<>

    1. Fn<> Is

  391. fn()fn()

    1. fn() isAnsiColorTerminal

  392. fn()fn()

    1. fn() isBitSet

  393. Fn<>Fn<>

    1. Fn<> IsCharType

  394. Fn<>Fn<>

    1. Fn<> IsContiguous

  395. Fn<>Fn<>

    1. Fn<> IsDevice

  396. Fn<>Fn<>

    1. Fn<> IsInteger

  397. Fn<>Fn<>

    1. Fn<> IsIntegral

  398. Fn<>Fn<>

    1. Fn<> IsLightWeight

  399. Fn<>Fn<>

    1. Fn<> IsSameType

  400. Fn<>Fn<>

    1. Fn<> IsSequence

  401. Fn<>Fn<>

    1. Fn<> IsSimple

  402. fn()fn()

    1. fn() isTerminal

  403. Fn<>Fn<>

    1. Fn<> IsView

  404. ClassClass

    1. Class Iter

  405. ConceptConcept

    1. Concept IteratorAssociatedTypesConcept

  406. SpecSpec

    1. Spec IteratorProxy

  407. SpecSpec

    1. Spec Iupac

  408. typedeftypedef

    1. typedef IupacIterator

  409. typedeftypedef

    1. typedef IupacString

  410. ClassClass

    1. Class JoinConfig

  411. SpecSpec

    1. Spec Joiner

  412. GroupGroup

    1. Group JoinStrategiesTags

  413. SpecSpec

    1. Spec JournaledSet

  414. SpecSpec

    1. Spec JournaledString

  415. ClassClass

    1. Class JournaledStringTree

  416. Fn<>Fn<>

    1. Fn<> Key

  417. fn()fn()

    1. fn() kruskalsAlgorithm

  418. Fn<>Fn<>

    1. Fn<> LENGTH

  419. ConceptConcept

    1. Concept LessThanComparableConcept

  420. TagTag

    1. Tag LevenshteinDistance

  421. SpecSpec

    1. Spec LevenshteinStringEnumerator

  422. ClassClass

    1. Class Lexical

  423. fn()fn()

    1. fn() lexicalCast

  424. fn()fn()

    1. fn() lexicalCastWithException

  425. ClassClass

    1. Class LF

  426. GroupGroup

    1. Group LFTableFibres

  427. ClassClass

    1. Class LibraryStoreElement

  428. varvar

    1. var LibraryStoreElementstd

  429. fn()fn()

    1. fn() localAlignment

  430. ClassClass

    1. Class LocalAlignmentEnumerator

  431. GroupGroup

    1. Group LocalChainingTags

  432. ClassClass

    1. Class LocalMatch

  433. ClassClass

    1. Class LocalMatchStore

  434. ClassClass

    1. Class LocalMatchStoreConfig

  435. fn()fn()

    1. fn() log2

  436. GroupGroup

    1. Group LogicalValuesTags

  437. GroupGroup

    1. Group LogicMetaprogramming

  438. ClassClass

    1. Class LogProb

  439. fn()fn()

    1. fn() longestCommonSubsequence

  440. fn()fn()

    1. fn() longestIncreasingSubsequence

  441. ClassClass

    1. Class Loop

  442. ClassClass

    1. Class LoopReverse

  443. fn()fn()

    1. fn() lowerBoundAlignedReads

  444. Fn<>Fn<>

    1. Fn<> MagicHeader

  445. Fn<>Fn<>

    1. Fn<> MakePacked

  446. Fn<>Fn<>

    1. Fn<> MakeSigned

  447. Fn<>Fn<>

    1. Fn<> MakeUnsigned

  448. fn()fn()

    1. fn() makeZipIterator

  449. fn()fn()

    1. fn() makeZipView

  450. ClassClass

    1. Class Map

  451. SpecSpec

    1. Spec MapperConfig

  452. SpecSpec

    1. Spec MapperConfigSize

  453. SpecSpec

    1. Spec MapperSpec

  454. ClassClass

    1. Class MarkovModel

  455. fn()fn()

    1. fn() matchRefinement

  456. ClassClass

    1. Class MatePairStoreElement

  457. ClassClass

    1. Class Matrix

  458. SpecSpec

    1. Spec MatrixScore

  459. SpecSpec

    1. Spec MaxRepeatsIterator

  460. Fn<>Fn<>

    1. Fn<> Member

  461. fn()fn()

    1. fn() memset

  462. GroupGroup

    1. Group MetafunctionSwitch

  463. GroupGroup

    1. Group MetaprogrammingMath

  464. ClassClass

    1. Class MMapConfig

  465. SpecSpec

    1. Spec MMapString

  466. SpecSpec

    1. Spec ModCyclicShapeModifiedIterator

  467. SpecSpec

    1. Spec ModCyclicShapeModifiedString

  468. ClassClass

    1. Class ModifiedAlphabet

  469. ClassClass

    1. Class ModifiedIterator

  470. ClassClass

    1. Class ModifiedString

  471. SpecSpec

    1. Spec ModReverseIterator

  472. SpecSpec

    1. Spec ModReverseString

  473. SpecSpec

    1. Spec ModViewModifiedIterator

  474. SpecSpec

    1. Spec ModViewModifiedString

  475. TagTag

    1. Tag Move

  476. ClassClass

    1. Class MsaOptions

  477. SpecSpec

    1. Spec MultiBfamPattern

  478. SpecSpec

    1. Spec MultiMemsIterator

  479. GroupGroup

    1. Group MultipleSequenceAlignmentTags

  480. SpecSpec

    1. Spec MultipleShiftAndPattern

  481. SpecSpec

    1. Spec MultiPoolAllocator

  482. SpecSpec

    1. Spec MumsIterator

  483. TagTag

    1. Tag Murphy10

  484. ConceptConcept

    1. Concept MutableBidirectionalIteratorConcept

  485. ConceptConcept

    1. Concept MutableForwardIteratorConcept

  486. ConceptConcept

    1. Concept MutableRandomAccessIteratorConcept

  487. ConceptConcept

    1. Concept MutableRootedIteratorConcept

  488. ConceptConcept

    1. Concept MutableRootedRandomAccessIteratorConcept

  489. SpecSpec

    1. Spec MyersPattern

  490. typedeftypedef

    1. typedef MyersUkkonen

  491. typedeftypedef

    1. typedef MyersUkkonenBanded

  492. typedeftypedef

    1. typedef MyersUkkonenGlobal

  493. typedeftypedef

    1. typedef MyersUkkonenGlobalBanded

  494. SpecSpec

    1. Spec N2AFScore

  495. SpecSpec

    1. Spec Namer

  496. ClassClass

    1. Class NameStoreCache

  497. fn()fn()

    1. fn() njTree

  498. SpecSpec

    1. Spec NonHierarchicalPexPattern

  499. TagTag

    1. Tag Nothing

  500. ConceptConcept

    1. Concept NumberConcept

  501. SpecSpec

    1. Spec OneGappedShape

  502. SpecSpec

    1. Spec OpenAddressingQGramIndex

  503. GroupGroup

    1. Group OpenAdressingTags

  504. SpecSpec

    1. Spec OracleBfamPattern

  505. SpecSpec

    1. Spec OracleMultiBfamPattern

  506. ConceptConcept

    1. Concept OrderedAlphabetConcept

  507. fn()fn()

    1. fn() orderOccurrences

  508. SpecSpec

    1. Spec OutEdgeIterator

  509. ConceptConcept

    1. Concept OutputIteratorConcept

  510. ConceptConcept

    1. Concept OutputStreamConcept

  511. SpecSpec

    1. Spec OutputStreamIterator

  512. GroupGroup

    1. Group OverflowStrategyTags

  513. SpecSpec

    1. Spec OwnerStringSet

  514. SpecSpec

    1. Spec PackedPair

  515. SpecSpec

    1. Spec PackedString

  516. SpecSpec

    1. Spec PackedTriple

  517. ClassClass

    1. Class Pair

  518. GroupGroup

    1. Group PairwiseLocalAlignmentAlgorithms

  519. typedeftypedef

    1. typedef Pam120

  520. typedeftypedef

    1. typedef Pam200

  521. typedeftypedef

    1. typedef Pam250

  522. typedeftypedef

    1. typedef Pam40

  523. GroupGroup

    1. Group ParallelismTags

  524. SpecSpec

    1. Spec ParseError

  525. fn()fn()

    1. fn() partialSum

  526. ClassClass

    1. Class Pattern

  527. typedeftypedef

    1. typedef Peptide

  528. typedeftypedef

    1. typedef PeptideIterator

  529. SpecSpec

    1. Spec PexPattern

  530. SpecSpec

    1. Spec PigeonholeFinder

  531. ClassClass

    1. Class PigeonholeParameters

  532. SpecSpec

    1. Spec PigeonholePattern

  533. ClassClass

    1. Class Pipe

  534. SpecSpec

    1. Spec PizzaChiliIndex

  535. GroupGroup

    1. Group PizzaChiliIndexFibres

  536. GroupGroup

    1. Group PizzaChiliIndexTags

  537. SpecSpec

    1. Spec PizzaChiliString

  538. #define#define

    1. #define PLATFORM_CUDA

  539. #define#define

    1. #define PLATFORM_GCC

  540. ClassClass

    1. Class PointAndCargo

  541. ClassClass

    1. Class Pool

  542. SpecSpec

    1. Spec PoolConfig

  543. SpecSpec

    1. Spec PoolConfigSize

  544. SpecSpec

    1. Spec PoolSpec

  545. fn()fn()

    1. fn() popCount

  546. Fn<>Fn<>

    1. Fn<> Position

  547. GroupGroup

    1. Group PositionCalculation

  548. SpecSpec

    1. Spec PositionIterator

  549. GroupGroup

    1. Group PrefixOrderTags

  550. SpecSpec

    1. Spec PrefixSegment

  551. fn()fn()

    1. fn() primsAlgorithm

  552. fn()fn()

    1. fn() printDebugLevel

  553. SpecSpec

    1. Spec PriorityHeap

  554. ClassClass

    1. Class PriorityType

  555. ClassClass

    1. Class ProfileChar

  556. SpecSpec

    1. Spec ProfileSeqFracScore

  557. SpecSpec

    1. Spec ProfileSeqScore

  558. fn()fn()

    1. fn() progressiveAlignment

  559. ConceptConcept

    1. Concept PropertyMapConcept

  560. ClassClass

    1. Class Proxy

  561. GroupGroup

    1. Group QGramIndexFibres

  562. ConceptConcept

    1. Concept RandomAccessContainerConcept

  563. ConceptConcept

    1. Concept RandomAccessIteratorConcept

  564. ClassClass

    1. Class Range

  565. ClassClass

    1. Class RankDictionary

  566. GroupGroup

    1. Group RankDictionaryFibres

  567. ClassClass

    1. Class RankSupportBitString

  568. GroupGroup

    1. Group RankSupportBitStringFibres

  569. fn()fn()

    1. fn() readEmblHeader

  570. ClassClass

    1. Class ReadStoreElement

  571. fn()fn()

    1. fn() reAlign

  572. fn()fn()

    1. fn() reAlignment

  573. SpecSpec

    1. Spec ReducedAminoAcid

  574. Fn<>Fn<>

    1. Fn<> Reference

  575. Fn<>Fn<>

    1. Fn<> RemoveConst

  576. Fn<>Fn<>

    1. Fn<> RemovePointer

  577. Fn<>Fn<>

    1. Fn<> RemoveReference

  578. Fn<>Fn<>

    1. Fn<> RemoveView

  579. ClassClass

    1. Class Repeat

  580. SpecSpec

    1. Spec ResizableContainerView

  581. fn()fn()

    1. fn() reverse

  582. fn()fn()

    1. fn() reverseComplement

  583. ConceptConcept

    1. Concept ReversibleContainerConcept

  584. ClassClass

    1. Class RightArrayBinaryTree

  585. GroupGroup

    1. Group RightArrayBinaryTreeFibres

  586. SpecSpec

    1. Spec RightArrayBinaryTreeIterator

  587. SpecSpec

    1. Spec Rna

  588. SpecSpec

    1. Spec Rna5

  589. typedeftypedef

    1. typedef Rna5Iterator

  590. typedeftypedef

    1. typedef Rna5String

  591. typedeftypedef

    1. typedef Rna5StringComplement

  592. typedeftypedef

    1. typedef Rna5StringReverse

  593. typedeftypedef

    1. typedef Rna5StringReverseComplement

  594. typedeftypedef

    1. typedef RnaIterator

  595. typedeftypedef

    1. typedef RnaString

  596. typedeftypedef

    1. typedef RnaStringComplement

  597. typedeftypedef

    1. typedef RnaStringReverse

  598. typedeftypedef

    1. typedef RnaStringReverseComplement

  599. SpecSpec

    1. Spec RoiFileIn

  600. SpecSpec

    1. Spec RoiFileOut

  601. ConceptConcept

    1. Concept RootedIteratorConcept

  602. ConceptConcept

    1. Concept RootedRandomAccessIteratorConcept

  603. ClassClass

    1. Class RuntimeError

  604. SpecSpec

    1. Spec Sampler

  605. Fn<>Fn<>

    1. Fn<> SAValue

  606. ClassClass

    1. Class Score

  607. ClassClass

    1. Class Seed

  608. ClassClass

    1. Class SeedDiagonal

  609. GroupGroup

    1. Group SeedExtensionTags

  610. ClassClass

    1. Class SeedSet

  611. ClassClass

    1. Class Segment

  612. ConceptConcept

    1. Concept SegmentableConcept

  613. GroupGroup

    1. Group SegmentMatchGenerationTags

  614. ClassClass

    1. Class SentinelRankDictionary

  615. GroupGroup

    1. Group SentinelRankDictionaryFibres

  616. #define#define

    1. #define SEQAN_DEVICE

  617. #define#define

    1. #define SEQAN_ENABLE_PARALLELISM

  618. #define#define

    1. #define SEQAN_GLOBAL

  619. #define#define

    1. #define SEQAN_HAS_BZIP2

  620. #define#define

    1. #define SEQAN_HAS_ZLIB

  621. #define#define

    1. #define SEQAN_HOST

  622. #define#define

    1. #define SEQAN_HOST_DEVICE

  623. #define#define

    1. #define SEQAN_IS_32_BIT

  624. #define#define

    1. #define SEQAN_IS_64_BIT

  625. #define#define

    1. #define SEQAN_OMP_PRAGMA

  626. #define#define

    1. #define SEQAN_PATH_TO_ROOT

  627. #define#define

    1. #define SEQAN_TEMP_FILENAME

  628. SpecSpec

    1. Spec SeqFileIn

  629. SpecSpec

    1. Spec SeqFileOut

  630. ClassClass

    1. Class SequenceOutputOptions

  631. fn()fn()

    1. fn() setBit

  632. fn()fn()

    1. fn() setBitTo

  633. SpecSpec

    1. Spec SetHorspoolPattern

  634. ClassClass

    1. Class Shape

  635. fn()fn()

    1. fn() shareResources

  636. SpecSpec

    1. Spec ShiftAndPattern

  637. SpecSpec

    1. Spec Shifter

  638. SpecSpec

    1. Spec ShiftOrPattern

  639. fn()fn()

    1. fn() shuffle

  640. ConceptConcept

    1. Concept SignedIntegerConcept

  641. SpecSpec

    1. Spec SimpleAllocator

  642. SpecSpec

    1. Spec SimpleHolder

  643. SpecSpec

    1. Spec SimpleIntervalsFileIn

  644. SpecSpec

    1. Spec SimpleIntervalsFileInOut

  645. ClassClass

    1. Class SimpleIntervalsIOContext

  646. SpecSpec

    1. Spec SimplePattern

  647. SpecSpec

    1. Spec SimpleScore

  648. typedeftypedef

    1. typedef SimpleScoreTypedef

  649. SpecSpec

    1. Spec SimpleSeed

  650. SpecSpec

    1. Spec SimpleShape

  651. ClassClass

    1. Class SimpleType

  652. SpecSpec

    1. Spec SinglePoolAllocator

  653. Fn<>Fn<>

    1. Fn<> Size

  654. SpecSpec

    1. Spec Skiplist

  655. fn()fn()

    1. fn() sortAlignedReads

  656. GroupGroup

    1. Group SortAlignedReadTags

  657. SpecSpec

    1. Spec SorterConfig

  658. SpecSpec

    1. Spec SorterConfigSize

  659. SpecSpec

    1. Spec SorterSpec

  660. SpecSpec

    1. Spec Source

  661. ClassClass

    1. Class SparseString

  662. GroupGroup

    1. Group SparseStringFibres

  663. Fn<>Fn<>

    1. Fn<> Spec

  664. fn()fn()

    1. fn() splitAlignment

  665. fn()fn()

    1. fn() splitGenBankHeader

  666. ClassClass

    1. Class Splitter

  667. GroupGroup

    1. Group StandardIntegers

  668. fn()fn()

    1. fn() startsWith

  669. SpecSpec

    1. Spec StdAdaptorIterator

  670. SpecSpec

    1. Spec StoreIntervalsIntervalTreeNode

  671. SpecSpec

    1. Spec StorePointsOnlyIntervalTreeNode

  672. ClassClass

    1. Class StreamBuffer

  673. ConceptConcept

    1. Concept StreamConcept

  674. GroupGroup

    1. Group StreamFormats

  675. SpecSpec

    1. Spec StreamIterator

  676. ClassClass

    1. Class String

  677. ConceptConcept

    1. Concept StringConcept

  678. ClassClass

    1. Class StringEnumerator

  679. ConceptConcept

    1. Concept StringIndexConcept

  680. ClassClass

    1. Class StringSet

  681. fn()fn()

    1. fn() stringToStringSet

  682. ConceptConcept

    1. Concept StringTreeConcept

  683. ConceptConcept

    1. Concept StringTrieConcept

  684. fn()fn()

    1. fn() stronglyConnectedComponents

  685. SpecSpec

    1. Spec SuffixSegment

  686. fn()fn()

    1. fn() sum

  687. fn()fn()

    1. fn() sumOfPairsScore

  688. SpecSpec

    1. Spec SuperMaxRepeatsFastIterator

  689. SpecSpec

    1. Spec SuperMaxRepeatsIterator

  690. SpecSpec

    1. Spec SwiftFinder

  691. SpecSpec

    1. Spec SwiftLocalFinder

  692. SpecSpec

    1. Spec SwiftLocalPattern

  693. ClassClass

    1. Class SwiftParameters

  694. SpecSpec

    1. Spec SwiftPattern

  695. SpecSpec

    1. Spec SwiftSemiGlobalFinder

  696. SpecSpec

    1. Spec SwiftSemiGlobalPattern

  697. SpecSpec

    1. Spec SyncFile

  698. fn()fn()

    1. fn() sysTime

  699. ClassClass

    1. Class TabixIndex

  700. ClassClass

    1. Class Tag

  701. ClassClass

    1. Class TagList

  702. ClassClass

    1. Class TagSelector

  703. fn()fn()

    1. fn() testAllOnes

  704. fn()fn()

    1. fn() testAllZeros

  705. GroupGroup

    1. Group TestSystemMacros

  706. ConceptConcept

    1. Concept TextConcept

  707. SpecSpec

    1. Spec TightDependentStringSet

  708. fn()fn()

    1. fn() toLower

  709. ClassClass

    1. Class ToolDoc

  710. GroupGroup

    1. Group TopDown

  711. SpecSpec

    1. Spec TopDownHistoryIterator

  712. SpecSpec

    1. Spec TopDownIterator

  713. fn()fn()

    1. fn() topologicalSort

  714. ClassClass

    1. Class ToStdAllocator

  715. fn()fn()

    1. fn() toUpper

  716. typedeftypedef

    1. typedef TraceBack

  717. fn()fn()

    1. fn() transitiveClosure

  718. fn()fn()

    1. fn() translate

  719. enumenum

    1. enum TranslationFrames

  720. SpecSpec

    1. Spec Tree

  721. SpecSpec

    1. Spec TrieBfamPattern

  722. ClassClass

    1. Class Triple

  723. fn()fn()

    1. fn() tripletLibraryExtension

  724. SpecSpec

    1. Spec TristateHolder

  725. ClassClass

    1. Class Tuple

  726. SpecSpec

    1. Spec Tupler

  727. fn()fn()

    1. fn() TView

  728. SpecSpec

    1. Spec TwoLevelRankDictionary

  729. SpecSpec

    1. Spec UcscFileIn

  730. SpecSpec

    1. Spec UcscFileOut

  731. ClassClass

    1. Class UcscIOContext

  732. ClassClass

    1. Class UcscRecord

  733. SpecSpec

    1. Spec UnbandedLocalAlignmentEnumerator

  734. SpecSpec

    1. Spec UndirectedGraph

  735. SpecSpec

    1. Spec UnexpectedEnd

  736. SpecSpec

    1. Spec UngappedShape

  737. typedeftypedef

    1. typedef UnicodeString

  738. ClassClass

    1. Class UnionFind

  739. ConceptConcept

    1. Concept UnsignedIntegerConcept

  740. GroupGroup

    1. Group UpgmaConfiguratorTags

  741. fn()fn()

    1. fn() upgmaTree

  742. fn()fn()

    1. fn() upperBoundAlignedReads

  743. Fn<>Fn<>

    1. Fn<> Value

  744. fn()fn()

    1. fn() valueConstruct

  745. fn()fn()

    1. fn() valueDestruct

  746. fn()fn()

    1. fn() variance

  747. SpecSpec

    1. Spec VcfFileIn

  748. SpecSpec

    1. Spec VcfFileOut

  749. ClassClass

    1. Class VcfHeader

  750. ClassClass

    1. Class VcfHeaderRecord

  751. ClassClass

    1. Class VcfIOContext

  752. ClassClass

    1. Class VcfRecord

  753. SpecSpec

    1. Spec VectorSet

  754. Fn<>Fn<>

    1. Fn<> VertexDescriptor

  755. SpecSpec

    1. Spec VertexIterator

  756. Fn<>Fn<>

    1. Fn<> View

  757. ClassClass

    1. Class VirtualStream

  758. ClassClass

    1. Class VolatilePtr

  759. SpecSpec

    1. Spec VSTreeIterator

  760. typedeftypedef

    1. typedef Vtml200

  761. SpecSpec

    1. Spec WaveletTree

  762. GroupGroup

    1. Group WaveletTreeFibres

  763. fn()fn()

    1. fn() weaklyConnectedComponents

  764. Fn<>Fn<>

    1. Fn<> WEIGHT

  765. SpecSpec

    1. Spec WildShiftAndPattern

  766. SpecSpec

    1. Spec WordGraph

  767. GroupGroup

    1. Group WOTDIndexFibres

  768. SpecSpec

    1. Spec WuManberPattern

  769. SpecSpec

    1. Spec ZipContainerView

  770. SpecSpec

    1. Spec ZipIterator

  771. fn()fn()

    1. fn() zscore