Spec
SimpleSeedDescribes a seed with start and end position and diagonal upper and lower bounds.
Describes a seed with start and end position and diagonal upper and lower bounds.
Extends | Seed |
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All Extended | Seed |
Defined in | <seqan/seeds.h> |
Signature |
template <[typename TConfig]>
class Seed<Simple, TConfig>;
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Template Parameters
TConfig |
The configuration to use. Defaults to DefaultSeedConfig. |
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Member Function Overview
Interface Function Overview
Interface Functions Inherited From Seed
Interface Metafunction Overview
Interface Metafunctions Inherited From Seed
Member Functions Detail
Seed::Seed();
Seed::Seed(beginPosH, beginPosV, length);
Seed::Seed(beginPosH, beginPosV, endPosH, endPosV);
Constructor
Parameters
beginPosH
|
The begin position in the horizontal position. |
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beginPosV
|
The begin position in the vertical position. |
length
|
The length of the seed (in both directions). |
endPosH
|
The end position in the horizontal position. |
endPosV
|
The end position in the vertical position. |
Data Races
Thread safety unknown!