SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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alignment → alphabet Relation

File in seqan3/alignmentIncludes file in seqan3/alphabet
aligned_sequence / aligned_sequence_concept.hppgap / gapped.hpp
aligned_sequence / aligned_sequence_concept.hpprange / sequence.hpp
aligned_sequence / debug_stream_alignment.hppviews / to_char.hpp
cigar_conversion / alignment_from_cigar.hppcigar / alphabet/cigar/cigar.hpp
cigar_conversion / cigar_from_alignment.hppcigar / alphabet/cigar/cigar.hpp
cigar_conversion / cigar_from_alignment.hppgap / gap.hpp
decorator / gap_decorator.hppalphabet/concept.hpp
decorator / gap_decorator.hppgap / gap.hpp
decorator / gap_decorator.hppgap / gapped.hpp
matrix / detail / aligned_sequence_builder.hppgap / gapped.hpp
matrix / detail / debug_matrix.hppdetail / debug_stream_alphabet.hpp
pairwise / detail / alignment/pairwise/detail/concept.hppalphabet/concept.hpp
scoring / detail / simd_match_mismatch_scoring_scheme.hppalphabet/concept.hpp
scoring / detail / simd_matrix_scoring_scheme.hppalphabet/concept.hpp
pairwise / align_result_selector.hppgap / gapped.hpp
scoring / aminoacid_scoring_scheme.hppaminoacid / aa27.hpp
scoring / nucleotide_scoring_scheme.hppnucleotide / dna15.hpp
scoring / scoring_scheme_base.hppalphabet/concept.hpp
scoring / scoring_scheme_concept.hppalphabet/concept.hpp
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