SeqAn3
3.0.1
The Modern C++ library for sequence analysis.
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all.hpp
Go to the documentation of this file.
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// -----------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
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// -----------------------------------------------------------------------------------------------------
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#pragma once
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#pragma GCC diagnostic push
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#pragma GCC diagnostic ignored "-Wdeprecated-declarations"
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#include <
seqan3/io/alignment_file/format_bam.hpp
>
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#include <
seqan3/io/alignment_file/format_sam.hpp
>
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#include <
seqan3/io/alignment_file/header.hpp
>
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#include <
seqan3/io/alignment_file/input.hpp
>
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#include <
seqan3/io/alignment_file/input_format_concept.hpp
>
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#include <
seqan3/io/alignment_file/input_options.hpp
>
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#include <
seqan3/io/alignment_file/output.hpp
>
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#include <
seqan3/io/alignment_file/output_format_concept.hpp
>
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#include <
seqan3/io/alignment_file/output_options.hpp
>
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#include <
seqan3/io/alignment_file/sam_tag_dictionary.hpp
>
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#pragma GCC diagnostic pop
sam_tag_dictionary.hpp
Provides the seqan3::sam_tag_dictionary class and auxiliaries.
format_sam.hpp
Provides the seqan3::format_sam.
input_format_concept.hpp
Provides seqan3::alignment_file_input_format and auxiliary classes.
header.hpp
Provides the seqan3::alignment_file_header class.
output_options.hpp
Provides seqan3::alignment_file_output_options.
format_bam.hpp
Provides the seqan3::format_bam.
input.hpp
Provides seqan3::alignment_file_input and corresponding traits classes.
output_format_concept.hpp
Provides seqan3::alignment_file_output_format and auxiliary classes.
input_options.hpp
Provides seqan3::alignment_file_input_options.
output.hpp
Provides seqan3::alignment_file_output and corresponding traits classes.
seqan3
io
alignment_file
all.hpp
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