SeqAn3
3.0.2
The Modern C++ library for sequence analysis.
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align_config_min_score.hpp
Go to the documentation of this file.
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// -----------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
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// -----------------------------------------------------------------------------------------------------
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#pragma once
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#include <
seqan3/alignment/configuration/detail.hpp
>
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#include <
seqan3/core/algorithm/pipeable_config_element.hpp
>
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namespace
seqan3::align_cfg
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{
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class
min_score
:
public
pipeable_config_element<min_score>
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{
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public
:
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int32_t
score
{
std::numeric_limits<int32_t>::lowest
()};
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constexpr
min_score
() noexcept = default;
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constexpr
min_score
(
min_score
const &) noexcept = default;
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constexpr
min_score
(
min_score
&&) noexcept = default;
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constexpr
min_score
& operator=(
min_score
const &) noexcept = default;
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constexpr
min_score
& operator=(
min_score
&&) noexcept = default;
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~
min_score
() noexcept = default;
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constexpr
min_score
(const int32_t
score
) :
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score
{
score
}
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{}
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static
constexpr seqan3::detail::align_config_id
id
{seqan3::detail::align_config_id::min_score};
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};
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}
// namespace seqan3::align_cfg
seqan3::align_cfg::min_score::score
int32_t score
Minimal score for the distance computation [default: -infinity].
Definition:
align_config_min_score.hpp:40
pipeable_config_element.hpp
Provides seqan3::pipeable_config_element.
std::numeric_limits::lowest
T lowest(T... args)
seqan3::align_cfg
A special sub namespace for the alignment configurations.
Definition:
align_config_band.hpp:23
seqan3::align_cfg::min_score::min_score
constexpr min_score() noexcept=default
Defaulted.
seqan3::align_cfg::min_score
Sets the minimal score (maximal errors) allowed during an distance computation e.g....
Definition:
align_config_min_score.hpp:37
detail.hpp
Provides some utility functions for the alignment configurations.
Version:
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3.0.3
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seqan3
alignment
configuration
align_config_min_score.hpp
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