Class Index

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a	concatenated_sequences (seqan3)	hit (seqan3::search_cfg)	parallel_policy (seqan3)	size_type (seqan3)
	configuration (seqan3)	hit_all (seqan3::search_cfg)	parallel_unsequenced_policy (seqan3)	small_string (seqan3)
aa10li (seqan3)	const_iterable_range (seqan3)	hit_all_best (seqan3::search_cfg)	parse_error (seqan3)	small_vector (seqan3)
aa10murphy (seqan3)	const_reference (seqan3)	hit_single_best (seqan3::search_cfg)	parser_design_error (seqan3)	standard_layout (seqan3)
aa20 (seqan3)	container (seqan3)	hit_strata (seqan3::search_cfg)	parser_invalid_argument (seqan3)	static_band (seqan3)
aa27 (seqan3)	counting_vector (seqan3)	i	phred42 (seqan3)	stream_REMOVEME (seqan3)
algorithm_result_generator_range::algorithm_range_iterator (seqan3)	d		phred63 (seqan3)	structure_file_input (seqan3)
algorithm_result_generator_range (seqan3)		implicitly_convertible_to (seqan3)	phred68legacy (seqan3)	structure_file_input_default_traits_aa (seqan3)
aligned_allocator (seqan3)	debug_stream_type (seqan3)	input_directory_validator (seqan3)	pipeable_config_element< derived_t > (seqan3)	structure_file_input_default_traits_rna (seqan3)
aligned_sequence (seqan3)	deep (seqan3::views)	input_file_validator (seqan3)	pod_tuple (seqan3)	structure_file_input_format (seqan3)
alignment_coordinate (seqan3)	design_error (seqan3)	input_stream_over (seqan3)	pod_tuple< type0 > (seqan3)	structure_file_input_options (seqan3)
alignment_file_header (seqan3)	difference_type (seqan3)	interleaved_bloom_filter (seqan3)	pod_tuple< type0, types... > (seqan3)	structure_file_input_traits (seqan3)
alignment_file_input (seqan3)	dna15 (seqan3)	invalid_alignment_configuration (seqan3)	alignment_file_header::program_info_t (seqan3)	structure_file_output (seqan3)
alignment_file_input_default_traits (seqan3)	dna3bs (seqan3)	invalid_char_assignment (seqan3)	pseudo_random_access_iterator (seqan3)	structure_file_output_format (seqan3)
alignment_file_input_format (seqan3)	dna4 (seqan3)	io_error (seqan3)	pseudo_random_access_range (seqan3)	structure_file_output_options (seqan3)
alignment_file_input_options (seqan3)	dna5 (seqan3)	is_constexpr_default_constructible (seqan3)	q	structured_aa (seqan3)
alignment_file_input_traits (seqan3)	dot_bracket3 (seqan3)	is_constexpr_default_constructible< t > (seqan3)		structured_rna (seqan3)
alignment_file_output (seqan3)	dssp9 (seqan3)	is_execution_policy (seqan3)	qualified (seqan3)	t
alignment_file_output_format (seqan3)	dynamic_bitset (seqan3)	l	quality_alphabet (seqan3)
alignment_file_output_options (seqan3)	e		quality_base (seqan3)	too_few_arguments (seqan3)
alignment_result (seqan3)		lower_bound (seqan3)	r	too_many_arguments (seqan3)
alphabet (seqan3::custom)	error_count (seqan3::search_cfg)	lower_diagonal (seqan3::align_cfg)		transformation_trait (seqan3)
alphabet (seqan3)	error_rate (seqan3::search_cfg)	m	random_access_container (seqan3)	trivial (seqan3)
alphabet< char_type > (seqan3::custom)	explicitly_convertible_to (seqan3)		range_compatible (seqan3)	trivially_copyable (seqan3)
alphabet< uint_type > (seqan3::custom)	extension_score (seqan3::align_cfg)	mask (seqan3)	range_innermost_value (seqan3)	trivially_destructible (seqan3)
alphabet_base (seqan3)	f	masked (seqan3)	aligned_allocator::rebind (seqan3)	tuple_element< elem_no, seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std)
alphabet_base< derived_type, 1ul, char_t > (seqan3)		match_score (seqan3)	record (seqan3)	tuple_element< elem_no, seqan3::record< field_types, field_ids > > (std)
alphabet_proxy (seqan3)	fields (seqan3)	max_error_deletion (seqan3::search_cfg)	ref_info_not_given (seqan3)	tuple_element< i, t< types... > > (std)
alphabet_tuple_base (seqan3)	file_open_error (seqan3)	max_error_insertion (seqan3::search_cfg)	reference (seqan3)	tuple_element< i, tuple_t > (std)
alphabet_variant (seqan3)	file_validator_base (seqan3)	max_error_substitution (seqan3::search_cfg)	regex_validator (seqan3)	tuple_like (seqan3)
aminoacid_alphabet (seqan3)	floating_point (seqan3)	max_error_total (seqan3::search_cfg)	remove_rvalue_reference (seqan3)	tuple_size< seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std)
aminoacid_base (seqan3)	fm_index (seqan3)	interleaved_bloom_filter::membership_agent (seqan3)	required_option_missing (seqan3)	tuple_size< seqan3::record< field_types, field_ids > > (std)
aminoacid_empty_base (seqan3)	fm_index_cursor (seqan3)	method_global (seqan3::align_cfg)	reservible_container (seqan3)	tuple_size< t< types... > > (std)
aminoacid_scoring_scheme (seqan3)	fm_index_cursor_specialisation (seqan3)	method_local (seqan3::align_cfg)	rna15 (seqan3)	tuple_size< tuple_t > (std)
argument_parser (seqan3)	fm_index_specialisation (seqan3)	min_score (seqan3::align_cfg)	rna4 (seqan3)	type_conversion_failed (seqan3)
argument_parser_compatible_option (seqan3)	format_bam (seqan3)	mismatch_score (seqan3)	rna5 (seqan3)	u
argument_parser_error (seqan3)	format_embl (seqan3)	n	rna_structure_alphabet (seqan3)
argument_parser_meta_data (seqan3)	format_error (seqan3)		rvalue_reference (seqan3)	unary_type_trait (seqan3)
argument_parsing (seqan3::custom)	format_fasta (seqan3)	named_enumeration (seqan3)	s	unexpected_end_of_input (seqan3)
arithmetic (seqan3)	format_fastq (seqan3)	nucleotide_alphabet (seqan3)		ungapped (seqan3)
arithmetic_range_validator (seqan3)	format_genbank (seqan3)	nucleotide_base (seqan3)	sam_dna16 (seqan3)	unhandled_extension_error (seqan3)
b	format_sam (seqan3)	nucleotide_scoring_scheme (seqan3)	sam_tag_dictionary (seqan3)	unknown_option (seqan3)
	format_vienna (seqan3)	o	sam_tag_type (seqan3)	unsequenced_policy (seqan3)
band_fixed_size (seqan3::align_cfg)	free_end_gaps_sequence1_leading (seqan3::align_cfg)		score_type (seqan3::align_cfg)	upper_bound (seqan3)
bi_fm_index (seqan3)	free_end_gaps_sequence1_trailing (seqan3::align_cfg)	on_result (seqan3::search_cfg)	scoring_scheme (seqan3::align_cfg)	upper_diagonal (seqan3::align_cfg)
bi_fm_index_cursor (seqan3)	free_end_gaps_sequence2_leading (seqan3::align_cfg)	on_result (seqan3::align_cfg)	scoring_scheme_base (seqan3)	user_input_error (seqan3)
bi_fm_index_cursor_specialisation (seqan3)	free_end_gaps_sequence2_trailing (seqan3::align_cfg)	open_score (seqan3::align_cfg)	scoring_scheme_for (seqan3)	v
bi_fm_index_specialisation (seqan3)	function_traits< std::function< return_t(args_t...)> > (seqan3)	option_declared_multiple_times (seqan3)	search_result (seqan3)
bin_count (seqan3)	g	output_alignment (seqan3::align_cfg)	seed (seqan3)	validation_error (seqan3)
bin_index (seqan3)		output_begin_position (seqan3::align_cfg)	semialphabet (seqan3)	validation_failed (seqan3)
bin_literal (seqan3)	gap (seqan3)	output_directory_validator (seqan3)	semialphabet_any (seqan3)	validator (seqan3)
bin_size (seqan3)	gap_cost_affine (seqan3::align_cfg)	output_end_position (seqan3::align_cfg)	sequence (seqan3)	value_list_validator (seqan3)
interleaved_bloom_filter::membership_agent::binning_bitvector (seqan3)	gap_decorator (seqan3)	output_file_validator (seqan3)	sequence_container (seqan3)	value_type (seqan3)
bitcompressed_vector (seqan3)	gap_decorator::gap_decorator_iterator (seqan3)	output_index_cursor (seqan3::search_cfg)	sequence_file_input (seqan3)	vectorised (seqan3::align_cfg)
builtin_character (seqan3)	gap_erase_failure (seqan3)	output_query_id (seqan3::search_cfg)	sequence_file_input_default_traits_aa (seqan3)	w
c	gap_open_score (seqan3)	output_reference_begin_position (seqan3::search_cfg)	sequence_file_input_default_traits_dna (seqan3)
	gap_scheme (seqan3)	output_reference_id (seqan3::search_cfg)	sequence_file_input_format (seqan3)	weakly_assignable_from (seqan3)
cereal_archive (seqan3)	gap_score (seqan3)	output_score (seqan3::align_cfg)	sequence_file_input_options (seqan3)	window_size (seqan3)
cereal_input_archive (seqan3)	h	output_sequence1_id (seqan3::align_cfg)	sequence_file_input_traits (seqan3)	writable_aligned_sequence (seqan3)
cereal_output_archive (seqan3)		output_sequence2_id (seqan3::align_cfg)	sequence_file_output (seqan3)	writable_alphabet (seqan3)
cereal_text_archive (seqan3)	hash< alphabet_t > (std)	output_stream_over (seqan3)	sequence_file_output_format (seqan3)	writable_quality_alphabet (seqan3)
cerealisable (seqan3)	hash< seqan3::dynamic_bitset< cap > > (std)	overflow_error_on_conversion (seqan3)	sequence_file_output_options (seqan3)	writable_semialphabet (seqan3)
cigar (seqan3)	hash< urng_t > (std)	p	sequenced_policy (seqan3)	wuss (seqan3)
cigar_op (seqan3)	hash_function_count (seqan3)		shape (seqan3)
		pair_like (seqan3)

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