SeqAn3
3.0.2
The Modern C++ library for sequence analysis.
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gapped.hpp
Go to the documentation of this file.
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// -----------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
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// -----------------------------------------------------------------------------------------------------
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#pragma once
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#include <
seqan3/alphabet/gap/gap.hpp
>
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#include <
seqan3/alphabet/composite/alphabet_variant.hpp
>
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namespace
seqan3
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{
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template
<
typename
alphabet_t>
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requires
writable_alphabet<alphabet_t>
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using
gapped
=
alphabet_variant<alphabet_t, gap>
;
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}
// namespace seqan3
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namespace
seqan3::detail
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{
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// ---------------------------------------------------------------------------------------------------------------------
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// is_gapped_alphabet constexpr variable
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// ---------------------------------------------------------------------------------------------------------------------
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template
<
typename
t>
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constexpr
bool
is_gapped_alphabet =
false
;
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template
<
typename
t>
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constexpr
bool
is_gapped_alphabet<gapped<t>> =
true
;
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}
// namespace seqan3::detail
seqan3::alphabet_variant
A combined alphabet that can hold values of either of its alternatives.
Definition:
alphabet_variant.hpp:133
alphabet_variant.hpp
Provides seqan3::alphabet_variant.
gap.hpp
Provides seqan3::gap.
seqan3
The main SeqAn3 namespace.
Definition:
aligned_sequence_concept.hpp:29
writable_alphabet
Refines seqan3::alphabet and adds assignability.
Version:
main_user
main_dev
3.4.0
3.3.0
3.2.0
3.1.0
3.0.3
3.0.2
3.0.1
3.0.0
seqan3
alphabet
gap
gapped.hpp
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