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SeqAn3
3.0.2
The Modern C++ library for sequence analysis.
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66 static constexpr detail::search_config_id
id{detail::search_config_id::max_error_total};
110 static constexpr detail::search_config_id
id{detail::search_config_id::max_error_substitution};
154 static constexpr detail::search_config_id
id{detail::search_config_id::max_error_insertion};
199 static constexpr detail::search_config_id
id{detail::search_config_id::max_error_deletion};
max_error_substitution & operator=(max_error_substitution &&)=default
Defaulted.
std::variant< error_count, error_rate > error
The error count or error rate.
Definition: max_error.hpp:172
std::variant< error_count, error_rate > error
The error count or error rate.
Definition: max_error.hpp:39
max_error_total(error_count error)
Initialises the total error with the given seqan3::search_cfg::error_count.
Definition: max_error.hpp:54
max_error_substitution(max_error_substitution &&)=default
Defaulted.
max_error_total(error_rate error)
Initialises the total error with the given seqan3::search_cfg::error_rate.
Definition: max_error.hpp:60
~max_error_total()=default
Defaulted.
max_error_total & operator=(max_error_total const &)=default
Defaulted.
max_error_insertion(error_rate error)
Initialises the insertion error with the given seqan3::search_cfg::error_rate.
Definition: max_error.hpp:148
Configuration element that represents the number or rate of substitution errors.
Definition: max_error.hpp:80
Configuration element that represents the number or rate of total errors.
Definition: max_error.hpp:36
Provides compatibility matrix for search configurations.
max_error_deletion(max_error_deletion &&)=default
Defaulted.
max_error_deletion(error_count error)
Initialises the deletion error with the given seqan3::search_cfg::error_count.
Definition: max_error.hpp:187
Provides seqan3::pipeable_config_element.
max_error_insertion(max_error_insertion const &)=default
Defaulted.
max_error_deletion()=default
Defaulted.
Configuration element that represents the number or rate of deletion errors.
Definition: max_error.hpp:169
Configuration element that represents the number or rate of insertion errors.
Definition: max_error.hpp:124
max_error_deletion(max_error_deletion const &)=default
Defaulted.
~max_error_substitution()=default
Defaulted.
A special sub namespace for the search configurations.
max_error_insertion & operator=(max_error_insertion &&)=default
Defaulted.
A strong type of underlying type double that represents the rate of errors.
Definition: max_error_common.hpp:44
std::variant< error_count, error_rate > error
The error count or error rate.
Definition: max_error.hpp:127
auto const move
A view that turns lvalue-references into rvalue-references.
Definition: move.hpp:68
max_error_insertion & operator=(max_error_insertion const &)=default
Defaulted.
A strong type of underlying type uint8_t that represents the number of errors.
Definition: max_error_common.hpp:30
max_error_deletion & operator=(max_error_deletion const &)=default
Defaulted.
max_error_substitution(max_error_substitution const &)=default
Defaulted.
max_error_substitution(error_rate error)
Initialises the substitution error with the given seqan3::search_cfg::error_rate.
Definition: max_error.hpp:104
max_error_total & operator=(max_error_total &&)=default
Defaulted.
max_error_substitution(error_count error)
Initialises the substitution error with the given seqan3::search_cfg::error_count.
Definition: max_error.hpp:98
max_error_total(max_error_total &&)=default
Defaulted.
max_error_substitution()=default
Defaulted.
max_error_deletion(error_rate error)
Initialises the deletion error with the given seqan3::search_cfg::error_rate.
Definition: max_error.hpp:193
Provides the error types for maximum number of errors.
max_error_insertion()=default
Defaulted.
max_error_total()=default
Defaulted.
Provides data structures used by different search algorithms.
~max_error_insertion()=default
Defaulted.
max_error_insertion(error_count error)
Initialises the insertion error with the given seqan3::search_cfg::error_count.
Definition: max_error.hpp:142
max_error_deletion & operator=(max_error_deletion &&)=default
Defaulted.
~max_error_deletion()=default
Defaulted.
max_error_total(max_error_total const &)=default
Defaulted.
std::variant< error_count, error_rate > error
The error count or error rate.
Definition: max_error.hpp:83
max_error_substitution & operator=(max_error_substitution const &)=default
Defaulted.
max_error_insertion(max_error_insertion &&)=default
Defaulted.