SeqAn3
3.0.2
The Modern C++ library for sequence analysis.
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input_options.hpp
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// -----------------------------------------------------------------------------------------------------
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// Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
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// Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
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// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
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// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
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// -----------------------------------------------------------------------------------------------------
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#pragma once
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#include <
seqan3/core/platform.hpp
>
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namespace
seqan3
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{
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template
<
typename
sequence_legal_alphabet,
bool
seq_qual_combined>
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struct
sequence_file_input_options
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{
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bool
truncate_ids
=
false
;
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bool
embl_genbank_complete_header
=
false
;
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};
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}
// namespace seqan3
seqan3::sequence_file_input_options::truncate_ids
bool truncate_ids
Read the ID string only up until the first whitespace character.
Definition:
input_options.hpp:28
seqan3::sequence_file_input_options::embl_genbank_complete_header
bool embl_genbank_complete_header
Read the complete_header into the seqan3::field::id for embl or genbank format.
Definition:
input_options.hpp:30
seqan3::sequence_file_input_options
The options type defines various option members that influence the behaviour of all or some formats.
Definition:
input_options.hpp:26
seqan3
The main SeqAn3 namespace.
Definition:
aligned_sequence_concept.hpp:29
platform.hpp
Provides platform and dependency checks.
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seqan3
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sequence_file
input_options.hpp
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