SeqAn3  3.0.3
The Modern C++ library for sequence analysis.
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all.hpp
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1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2021, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2021, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
13 #pragma once
14 
34 #include <seqan3/io/sam_file/format_bam.hpp>
35 #include <seqan3/io/sam_file/format_sam.hpp>
36 #include <seqan3/io/sam_file/header.hpp>
37 #include <seqan3/io/sam_file/input.hpp>
38 #include <seqan3/io/sam_file/input_format_concept.hpp>
39 #include <seqan3/io/sam_file/input_options.hpp>
40 #include <seqan3/io/sam_file/output.hpp>
41 #include <seqan3/io/sam_file/output_format_concept.hpp>
42 #include <seqan3/io/sam_file/output_options.hpp>
43 #include <seqan3/io/sam_file/sam_tag_dictionary.hpp>
output.hpp
Provides seqan3::sam_file_output and corresponding traits classes.
format_bam.hpp
Provides the seqan3::format_bam.
format_sam.hpp
Provides the seqan3::format_sam.
header.hpp
Provides the seqan3::sam_file_header class.
input.hpp
Provides seqan3::sam_file_input and corresponding traits classes.
input_format_concept.hpp
Provides seqan3::sam_file_input_format and auxiliary classes.
input_options.hpp
Provides seqan3::sam_file_input_options.
output_format_concept.hpp
Provides seqan3::sam_file_output_format and auxiliary classes.
output_options.hpp
Provides seqan3::sam_file_output_options.
sam_tag_dictionary.hpp
Provides the seqan3::sam_tag_dictionary class and auxiliaries.