SeqAn3  3.0.3
The Modern C++ library for sequence analysis.
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translation_genetic_code.hpp
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1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2021, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2021, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
13 #pragma once
14 
15 #include <seqan3/core/platform.hpp>
16 
17 namespace seqan3
18 {
27 enum struct genetic_code : uint8_t
28 {
29  canonical = 1,
30 #ifdef SEQAN3_DEPRECATED_310
32 #endif // SEQAN3_DEPRECATED_310
33 // vert_mitochondrial,
34 // yeast_mitochondrial,
35 // mold_mitochondrial,
36 // invert_mitochondrial,
37 // ciliate,
38 // flatworm_mitochondrial = 9,
39 // euplotid,
40 // prokaryote,
41 // alt_yeast,
42 // ascidian_mitochondrial,
43 // alt_flatworm_mitochondrial,
44 // blepharisma,
45 // chlorophycean_mitochondrial,
46 // trematode_mitochondrial = 21,
47 // scenedesmus_mitochondrial,
48 // thraustochytrium_mitochondrial,
49 // pterobranchia_mitochondrial,
50 // gracilibacteria
51 };
52 }
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:29
genetic_code
Genetic codes used for translation of nucleotides into amino acids.
Definition: translation_genetic_code.hpp:28
@ canonical
The Standard Code.
Provides platform and dependency checks.
#define SEQAN3_DEPRECATED_310
Deprecation message for SeqAn 3.1.0 release.
Definition: platform.hpp:203