SeqAn3 3.1.0
The Modern C++ library for sequence analysis.
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all.hpp
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1// -----------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2021, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2021, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6// -----------------------------------------------------------------------------------------------------
7
266#pragma once
267
268#include <seqan3/alignment/pairwise/align_pairwise.hpp>
269#include <seqan3/alignment/pairwise/align_result_selector.hpp>
270#include <seqan3/alignment/pairwise/alignment_algorithm.hpp>
271#include <seqan3/alignment/pairwise/alignment_configurator.hpp>
272#include <seqan3/alignment/pairwise/alignment_result.hpp>
273#include <seqan3/alignment/pairwise/edit_distance_algorithm.hpp>
274#include <seqan3/alignment/pairwise/edit_distance_fwd.hpp>
275#include <seqan3/alignment/pairwise/edit_distance_unbanded.hpp>
276#include <seqan3/alignment/pairwise/policy/all.hpp>
align_pairwise.hpp
Provides pairwise alignment function.
align_result_selector.hpp
Provides seqan3::detail::align_result_selector.
alignment_algorithm.hpp
Provides seqan3::detail::alignment_algorithm.
alignment_configurator.hpp
Provides seqan3::detail::alignment_selector.
alignment_result.hpp
Provides seqan3::alignment_result.
edit_distance_algorithm.hpp
Provides seqan3::detail::edit_distance_algorithm.
edit_distance_fwd.hpp
Forwards for seqan3::edit_distance_unbanded related types.
edit_distance_unbanded.hpp
Provides a pairwise alignment algorithm for edit distance but without band.