SeqAn3 3.3.0
The Modern C++ library for sequence analysis.
|
cigar()
and then use seqan3::alignment_from_cigar
to retrieve the alignment. seqan3::sam_record::cigar()
information directly and check the value for soft clipping (S) at the front of the CIGAR string. It is synonym to the offset. If not soft clipping is present at the front, the offset is zero.