Overview

Concepts

Classes

Specializations

Shortcuts

Functions

Alignments

Alphabets

Array Handling

Blast

Chaining

Comparisons

Containers

Content Manipulation

Dependent Objects

Graph

Index

Input/Output

Iteration

Map

Memory

Miscellaneous

Motif Search

Pipelining

Scoring

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find

findBegin

getBeginScore

getScore

haystack

needle

scoreLimit

scoringScheme

setHaystack

setNeedle

setPosition

setScoreLimit

setScoringScheme

Seed Handling

Sequences

Metafunctions

Tags

Adaptions

Examples

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