Function

createQGramIndexSAOnly

Builds the suffix array of a q-gram index on a sequence.

Include Headers

seqan/index.h

Parameters

The resulting list in which all q-grams are sorted alphabetically. | |

The sequence. | |

The shape to be used. q is the length of this shape Types: Shape | |

Store every |

Remarks

This function should not be called directly. Please use indexCreate or indexRequire.
The resulting tables must have appropriate size before calling this function.

Member of

SeqAn - Sequence Analysis Library - www.seqan.de