Class Specialization
PMode
Represents the P computation scheme for handling "zero" probabilities.
Pseudocount<TValue, PMode>
Include Headers
seqan/find_motif.h
Parameters
TValue
The type of sequence which is considered.
Types: AminoAcid, Dna
Remarks
The P mode computation scheme distributes the pseudocounts among the various residue according to their background probabilities.
Specialization of
Metafunctions
ValueType of the items in the container or behind an iterator. (Pseudocount)
Functions
convertSetOfPatternsToProfileConverts a set of sequence patterns into a profile. (Pseudocount)
normalizeDetermines the normalized frequencies. (Pseudocount)
SeqAn - Sequence Analysis Library - www.seqan.de
 

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