header.hpp File Reference

Provides the seqan3::sam_file_header class. More...

#include <deque>
#include <ranges>
#include <unordered_map>
#include <vector>
#include <seqan3/alphabet/concept.hpp>
#include <seqan3/io/sam_file/detail/cigar.hpp>
#include <seqan3/utility/views/type_reduce.hpp>

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Classes
struct	seqan3::sam_file_header< ref_ids_type >::key_hasher
	Custom hash function since std::hash is not defined for all range types (e.g. std::span<char>). More...
class	seqan3::sam_file_header< ref_ids_type >
	Stores the header information of SAM/BAM files. More...
struct	seqan3::sam_file_program_info_t
	Stores information of the program/tool that was used to create a SAM/BAM file. More...

Namespaces
namespace	seqan3
	The main SeqAn3 namespace.

Detailed Description

Provides the seqan3::sam_file_header class.

Author

Svenja Mehringer <svenja.mehringer AT fu-berlin.de>