SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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Provides various utility functions required only for input. More...
#include <algorithm>
#include <concepts>
#include <filesystem>
#include <iostream>
#include <ranges>
#include <span>
#include <string>
#include <tuple>
#include <seqan3/contrib/stream/bgzf.hpp>
#include <seqan3/io/detail/magic_header.hpp>
#include <seqan3/io/exception.hpp>
#include <seqan3/utility/concept.hpp>
Go to the source code of this file.
Namespaces | |
namespace | seqan3 |
The main SeqAn3 namespace. | |
namespace | seqan3::detail |
The internal SeqAn3 namespace. | |
Functions | |
template<builtin_character char_t> | |
auto | seqan3::detail::make_secondary_istream (std::basic_istream< char_t > &primary_stream) |
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts. | |
template<builtin_character char_t> | |
auto | seqan3::detail::make_secondary_istream (std::basic_istream< char_t > &primary_stream, std::filesystem::path &filename) -> std::unique_ptr< std::basic_istream< char_t >, std::function< void(std::basic_istream< char_t > *)> > |
Depending on the magic bytes of the given stream, return a decompression stream or forward the primary stream. | |
template<std::ranges::forward_range ref_t, std::ranges::forward_range query_t> requires std::equality_comparable_with<std::ranges::range_reference_t<ref_t>, std::ranges::range_reference_t<query_t>> | |
bool | seqan3::detail::starts_with (ref_t &&reference, query_t &&query) |
Check whether the query range is a prefix of the reference range. | |
Provides various utility functions required only for input.