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Raptor 4.0.0-rc.1
A fast and space-efficient pre-filter
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Inheritance diagram for raptor::threshold::threshold:
Collaboration diagram for raptor::threshold::threshold:Public Member Functions | |
| size_t | get (size_t const minimiser_count) const noexcept |
| threshold & | operator= (threshold &&)=default |
| threshold & | operator= (threshold const &)=default |
| threshold (threshold &&)=default | |
| threshold (threshold const &)=default | |
| threshold (threshold_parameters const &arguments) | |
Protected Types | |
| enum class | threshold_kinds : uint8_t { probabilistic , lemma , percentage } |
Protected Attributes | |
| uint8_t | errors {} |
| size_t | kmer_lemma {} |
| size_t | maximal_number_of_minimizers {} |
| size_t | minimal_number_of_minimizers {} |
| std::vector< size_t > | precomp_correction {} |
| std::vector< size_t > | precomp_thresholds {} |
| threshold_kinds | threshold_kind {threshold_kinds::probabilistic} |
| double | threshold_percentage {} |