SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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Provides seqan3::views::minimiser. More...
#include <algorithm>
#include <deque>
#include <seqan3/core/detail/empty_type.hpp>
#include <seqan3/core/range/detail/adaptor_from_functor.hpp>
#include <seqan3/core/range/type_traits.hpp>
#include <seqan3/utility/range/concept.hpp>
#include <seqan3/utility/type_traits/lazy_conditional.hpp>
Go to the source code of this file.
Classes | |
class | seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range > |
Iterator for calculating minimisers. More... | |
struct | seqan3::detail::minimiser_fn |
seqan3::views::minimiser's range adaptor object type (non-closure). More... | |
class | seqan3::detail::minimiser_view< urng1_t, urng2_t > |
The type returned by seqan3::views::minimiser. More... | |
Namespaces | |
namespace | seqan3 |
The main SeqAn3 namespace. | |
namespace | seqan3::detail |
The internal SeqAn3 namespace. | |
namespace | seqan3::views |
The SeqAn namespace for views. | |
Functions | |
template<std::ranges::viewable_range rng1_t, std::ranges::viewable_range rng2_t> | |
seqan3::detail::minimiser_view (rng1_t &&, rng2_t &&, size_t const window_size) -> minimiser_view< std::views::all_t< rng1_t >, std::views::all_t< rng2_t > > | |
A deduction guide for the view class template. | |
template<std::ranges::viewable_range rng1_t> | |
seqan3::detail::minimiser_view (rng1_t &&, size_t const window_size) -> minimiser_view< std::views::all_t< rng1_t > > | |
A deduction guide for the view class template. | |
Variables | |
constexpr auto | seqan3::views::minimiser |
Computes minimisers for a range of comparable values. A minimiser is the smallest value in a window. | |
Provides seqan3::views::minimiser.