policy_optimum_tracker.hpp File Reference

Provides seqan3::detail::policy_optimum_tracker. More...

#include <limits>
#include <seqan3/alignment/matrix/detail/coordinate_matrix.hpp>
#include <seqan3/alignment/matrix/detail/matrix_coordinate.hpp>
#include <seqan3/alignment/pairwise/detail/type_traits.hpp>
#include <seqan3/core/configuration/configuration.hpp>
#include <seqan3/core/detail/template_inspection.hpp>
#include <seqan3/utility/tuple/concept.hpp>

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Classes
struct	seqan3::detail::max_score_banded_updater
	A function object that compares and possibly updates the alignment optimum with the current cell. More...
struct	seqan3::detail::max_score_updater
	A function object that compares and possibly updates the alignment optimum with the current cell. More...
class	seqan3::detail::policy_optimum_tracker< alignment_configuration_t, optimum_updater_t >
	Implements the tracker to store the global optimum for a particular alignment computation. More...

Namespaces
namespace	seqan3
	The main SeqAn3 namespace.
namespace	seqan3::detail
	The internal SeqAn3 namespace.

Detailed Description

Provides seqan3::detail::policy_optimum_tracker.

Author

Rene Rahn <rene.rahn AT fu-berlin.de>

Lydia Buntrock <lydia.buntrock AT fu-berlin.de>