Provides the configuration to define the hit strategies "hit_strata", "hit_all", "hit_all_best", "hit_single_best". More...
#include <variant>
#include <seqan3/core/algorithm/pipeable_config_element.hpp>
#include <seqan3/core/detail/empty_type.hpp>
#include <seqan3/core/type_list/traits.hpp>
#include <seqan3/search/configuration/detail.hpp>
Go to the source code of this file.
Classes | |
class | seqan3::search_cfg::hit |
A dynamic configuration element to configure the hit strategy at runtime. More... | |
class | seqan3::search_cfg::hit_all |
Configuration element to receive all hits within the error bounds. More... | |
class | seqan3::search_cfg::hit_all_best |
Configuration element to receive all hits with the lowest number of errors within the error bounds. More... | |
class | seqan3::search_cfg::hit_single_best |
Configuration element to receive a single best hit with the lowest number of errors within the error bounds. More... | |
class | seqan3::search_cfg::hit_strata |
Configuration element to receive all hits with the best number of errors plus the given stratum. All hits are found with the fewest number of errors plus 'stratum'. More... | |
Namespaces | |
seqan3 | |
The main SeqAn3 namespace. | |
seqan3::search_cfg | |
A special sub namespace for the search configurations. | |
Provides the configuration to define the hit strategies "hit_strata", "hit_all", "hit_all_best", "hit_single_best".