SeqAn3 3.1.0
The Modern C++ library for sequence analysis.
concept.hpp File Reference

Core alphabet concept and free function/type trait wrappers. More...

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struct  seqan3::custom::alphabet< t >
 A type that can be specialised to provide customisation point implementations so that third party types model alphabet concepts. More...


namespace  seqan3
 The main SeqAn3 namespace.
namespace  seqan3::custom
 A namespace for third party and standard library specialisations of SeqAn customisation points.


template<typename alphabet_type >
using seqan3::alphabet_char_t = decltype(seqan3::to_char(std::declval< alphabet_type const >()))
 The char_type of the alphabet; defined as the return type of seqan3::to_char. More...
template<typename semi_alphabet_type >
using seqan3::alphabet_rank_t = decltype(seqan3::to_rank(std::declval< semi_alphabet_type >()))
 The rank_type of the semi-alphabet; defined as the return type of seqan3::to_rank. ! More...


template<typename alph_t >
constexpr auto seqan3::alphabet_size = detail::adl_only::alphabet_size_cpo<alph_t>{}()
 A type trait that holds the size of a (semi-)alphabet. More...
Function objects
constexpr auto seqan3::assign_char_strictly_to = detail::adl_only::assign_char_strictly_to_fn{}
 Assign a character to an alphabet object, throw if the character is not valid. More...
constexpr auto seqan3::assign_char_to = detail::adl_only::assign_char_to_cpo{}
 Assign a character to an alphabet object. More...
constexpr auto seqan3::assign_rank_to = detail::adl_only::assign_rank_to_cpo{}
 Assign a rank to an alphabet object. More...
template<typename alph_t >
constexpr auto seqan3::char_is_valid_for = detail::adl_only::char_is_valid_for_cpo<alph_t>{}
 Returns whether a character is in the valid set of a seqan3::alphabet (usually implies a bijective mapping to an alphabet value). More...
constexpr auto seqan3::to_char = detail::adl_only::to_char_cpo{}
 Return the char representation of an alphabet object. More...
constexpr auto seqan3::to_rank = detail::adl_only::to_rank_cpo{}
 Return the rank representation of a (semi-)alphabet object. More...

Detailed Description

Core alphabet concept and free function/type trait wrappers.

Hannes Hauswedell <hannes.hauswedell AT>