SeqAn3 3.3.0
The Modern C++ library for sequence analysis.
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Provides seqan3::align_config::gap_cost_affine. More...
#include <seqan3/alignment/configuration/detail.hpp>
#include <seqan3/core/configuration/pipeable_config_element.hpp>
#include <seqan3/core/detail/strong_type.hpp>
Go to the source code of this file.
Classes | |
struct | seqan3::align_cfg::extension_score |
A strong type of underlying type int32_t that represents the score (usually negative) of any character against a gap character. More... | |
class | seqan3::align_cfg::gap_cost_affine |
A configuration element for the affine gap cost scheme. More... | |
struct | seqan3::align_cfg::open_score |
A strong type of underlying type int32_t that represents a score (usually negative) that is incurred once per stretch of consecutive gaps. More... | |
Namespaces | |
namespace | seqan3 |
The main SeqAn3 namespace. | |
namespace | seqan3::align_cfg |
A special sub namespace for the alignment configurations. | |
Provides seqan3::align_config::gap_cost_affine.