SeqAn3
3.3.0
The Modern C++ library for sequence analysis.
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Welcome
Setup
Quick Setup (using CMake)
Tutorial
First steps with SeqAn
Parsing command line arguments with Sharg
C++ Concepts
Alphabets in SeqAn
Ranges
Minimisers
Sequence File Input and Output
Pairwise Alignment
Indexing and searching with SeqAn
SAM Input and Output in SeqAn
Implementing your own read mapper with SeqAn
How-To
Porting from SeqAn2
How to write an argument parser with subcommands
How to serialise SeqAn data structures
How to write a view
How to write your own alphabet
Cookbook
About
Stability and long-term promises
Citing
Customisation
Changelog
Copyright
Code of Conduct
Contributing
API Reference
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kmer_index Directory Reference
Directory dependency graph for kmer_index:
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Files
file
search/kmer_index/all.hpp
[code]
Meta-header for the
Search / k-mer Index submodule
.
file
shape.hpp
[code]
Provides
seqan3::shape
.
Version:
main_user
main_dev
3.4.0
3.3.0
3.2.0
3.1.0
3.0.3
3.0.2
3.0.1
3.0.0
seqan3
search
kmer_index
Generated on Thu Aug 17 2023 14:29:13 for SeqAn3 by
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