SeqAn3
3.4.0-rc.4
The Modern C++ library for sequence analysis.
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Setup
Quick Setup (using CMake)
Tutorial
First steps with SeqAn
Parsing command line arguments with Sharg
C++ Concepts
Alphabets in SeqAn
Ranges
Minimisers
Sequence File Input and Output
Pairwise Alignment
Indexing and searching with SeqAn
SAM Input and Output in SeqAn
Implementing your own read mapper with SeqAn
How-To
Porting from SeqAn2
How to write an argument parser with subcommands
How to serialise SeqAn data structures
How to write a view
How to write your own alphabet
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sdsl_index_type_ Class Reference
The documentation for this class was generated from the following files:
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Version:
sdsl_index_type_
Generated on Mon Apr 7 2025 12:32:02 for SeqAn3 by
1.9.8
1.9.8 