detail.hpp File Reference

Helper functions (e.g. conversions) for the structure IO submodule. More...

#include <map>
#include <ranges>
#include <stack>
#include <seqan3/alphabet/structure/concept.hpp>
#include <seqan3/io/exception.hpp>

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Namespaces
namespace	seqan3
	The main SeqAn3 namespace.
namespace	seqan3::detail
	The internal SeqAn3 namespace.

Functions
template<typename structure_alph_type , typename bpp_type , std::ranges::range structure_type>
void	seqan3::detail::bpp_from_rna_structure (bpp_type &bpp, structure_type const &structure, double weight=1.)
	Transforms a structure annotation string into a base pair probability matrix.

Detailed Description

Helper functions (e.g. conversions) for the structure IO submodule.

Author

Jörg Winkler <j.winkler AT fu-berlin.de>