seqan3::sequence_file_input_options< sequence_legal_alphabet > Struct Template Reference

The options type defines various option members that influence the behaviour of all or some formats. More...

#include <seqan3/io/sequence_file/input_options.hpp>

Inheritance diagram for seqan3::sequence_file_input_options< sequence_legal_alphabet >:

Public Attributes
bool	embl_genbank_complete_header = false
	Read the complete_header into the seqan3::field::id for embl or genbank format.
bool	fasta_ignore_blanks_before_id = true
	Remove spaces after ">" (or ";") before the actual ID.
bool	truncate_ids = false
	Read the ID string only up until the first whitespace character.

Detailed Description

template<typename sequence_legal_alphabet>
struct seqan3::sequence_file_input_options< sequence_legal_alphabet >

The options type defines various option members that influence the behaviour of all or some formats.

Template Parameters

sequence_legal_alphabet_

The sequence legal alphabet exposed as type trait to the format.

Remarks

For a complete overview, take a look at Sequence File

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The documentation for this struct was generated from the following file:

• sequence_file/input_options.hpp