SeqAn3 3.4.0-rc.4
The Modern C++ library for sequence analysis.
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alignment/pairwise/detail/concept.hpp
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1// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
2// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
3// SPDX-License-Identifier: BSD-3-Clause
4
10#pragma once
11
12#include <ranges>
13#include <tuple>
14
17
18namespace seqan3::detail
19{
20
34template <typename t>
35concept sequence_pair = requires () {
36 requires tuple_like<t>;
37 requires std::tuple_size_v<t> == 2;
38 requires std::ranges::forward_range<std::tuple_element_t<0, t>>;
39 requires std::ranges::forward_range<std::tuple_element_t<1, t>>;
42};
44
57template <typename t>
58concept sequence_pair_range = std::ranges::forward_range<t> && sequence_pair<std::ranges::range_value_t<t>>;
60
79template <typename t>
80concept indexed_sequence_pair_range = std::ranges::forward_range<t> && requires (std::ranges::range_value_t<t> value) {
81 requires tuple_like<decltype(value)>;
82 requires std::tuple_size_v<decltype(value)> == 2;
83 requires sequence_pair<std::tuple_element_t<0, decltype(value)>>;
84 requires std::copy_constructible<std::tuple_element_t<1, decltype(value)>>;
85};
87
102template <typename t>
103concept align_pairwise_single_input =
104 (sequence_pair<std::remove_reference_t<t>> && std::is_lvalue_reference_v<t>)
105 || (std::ranges::viewable_range<std::tuple_element_t<0, std::remove_reference_t<t>>>
106 && std::ranges::viewable_range<std::tuple_element_t<1, std::remove_reference_t<t>>>);
108
127template <typename t>
128concept align_pairwise_range_input =
129 std::ranges::forward_range<t> && sequence_pair<std::ranges::range_value_t<t>>
130 && ((std::ranges::viewable_range<t> && std::is_lvalue_reference_v<std::ranges::range_reference_t<t>>)
131 || align_pairwise_single_input<std::remove_reference_t<std::ranges::range_reference_t<t>>>);
133} // namespace seqan3::detail
Core alphabet concept and free function/type trait wrappers.
The basis for seqan3::alphabet, but requires only rank interface (not char).
Whether a type behaves like a tuple.
T tuple_size_v
Provides seqan3::tuple_like.
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