HIBF 1.0.0-rc.1
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Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level 12345]
 Nseqan
 Nhibf
 Nbuild
 Cbin_size_parametersContains parameters for bin_size_in_bits
 Cbuild_dataContains information used for building
 Nlayout
 Cdata_storeContains information used for the layout
 Cprevious_levelStores information of the previous level of a given IBF
 Cfpr_correction_parametersContains parameters for compute_fpr_correction
 CgraphContains the layout graph structure
 Cnode
 Chierarchical_binningHierarchical binning algorithm
 ClayoutThe layout
 Cmax_bin
 Cuser_bin
 Crelaxed_fpr_correction_parametersContains parameters for compute_relaxed_fpr_correction
 Csimple_binningDistributes x Technical Bins across y User Bins while minimizing the maximal Technical Bin size
 Nsketch
 Ntoolbox
 Cclustering_nodeType for a node in the clustering tree when for the rearrangement
 CentryEntry of the distance matrix that has the id of a cluster with its neighbors in a prio queue
 CneighborElement of the second priority queue layer of the distance matrix
 ChyperloglogHyperLogLog estimates
 CminhashesMinHash sketches design to be used for Locality sensitive hashing
 Cbin_countA strong type that represents the number of bins for the seqan::hibf::interleaved_bloom_filter
 Cbin_indexA strong type that represents the bin index for the seqan::hibf::interleaved_bloom_filter
 Cbin_sizeA strong type that represents the number of bits for each bin in the seqan::hibf::interleaved_bloom_filter
 Cbit_vectorAn bit vector
 Cconcurrent_timerA timer with a thread-safe operator+=()
 CconfigThe configuration used to build an (H)IBF
 Ccounting_vectorA data structure that behaves like a std::vector and can be used to consolidate the results of multiple calls to seqan::hibf::interleaved_bloom_filter::membership_agent_type::bulk_contains
 Chash_function_countA strong type that represents the number of hash functions for the seqan::hibf::interleaved_bloom_filter
 Chierarchical_interleaved_bloom_filterThe Hierarchical Interleaved Bloom Filter (HIBF) - Fast answers to set-membership queries for multiple bins
 Ccounting_agent_typeManages counting ranges of values for the seqan::hibf::hierarchical_interleaved_bloom_filter
 Cmembership_agent_type
 Cprevious_ibf_id_pairContains information about the parent IBF and bin index
 Cinsert_iterator
 Cinterleaved_bloom_filterThe IBF binning directory. A data structure that efficiently answers set-membership queries for multiple bins
 Ccounting_agent_typeManages counting ranges of values for the seqan::hibf::interleaved_bloom_filter
 Cmembership_agent_typeManages membership queries for the seqan::hibf::interleaved_bloom_filter
 Cprint_t
 Cserial_timerA timer