debug_matrix.hpp File Reference

Provides the declaration of seqan3::detail::debug_matrix. More...

#include <iomanip>
#include <sstream>
#include <seqan3/alignment/matrix/detail/matrix_concept.hpp>
#include <seqan3/alignment/matrix/detail/row_wise_matrix.hpp>
#include <seqan3/alignment/matrix/detail/trace_directions.hpp>
#include <seqan3/alphabet/detail/debug_stream_alphabet.hpp>
#include <seqan3/core/debug_stream/debug_stream_type.hpp>
#include <seqan3/core/debug_stream/optional.hpp>
#include <seqan3/core/debug_stream/range.hpp>
#include <seqan3/core/detail/template_inspection.hpp>

Include dependency graph for debug_matrix.hpp:

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Classes
struct	seqan3::alignment_matrix_printer< alignment_matrix_t >
	The printer for alignment scoring and trace matrices. More...
class	seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >
	A debug matrix to wrap alignment matrices and sequences and make them printable together. More...
struct	seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >::format_type
	Format used by seqan3::detail::debug_matrix. More...

Namespaces
namespace	seqan3
	The main SeqAn3 namespace.
namespace	seqan3::detail
	The internal SeqAn3 namespace.

Detailed Description

Provides the declaration of seqan3::detail::debug_matrix.

Author

Marcel Ehrhardt <marcel.ehrhardt AT fu-berlin.de>