#include <algorithm>
#include <atomic>
#include <cassert>
#include <cinttypes>
#include <cmath>
#include <cstddef>
#include <filesystem>
#include <fstream>
#include <functional>
#include <iomanip>
#include <mutex>
#include <numeric>
#include <optional>
#include <random>
#include <stdexcept>
#include <string>
#include <tuple>
#include <utility>
#include <vector>
#include <chopper/layout/input.hpp>
#include <hibf/build/build_data.hpp>
#include <hibf/config.hpp>
#include <hibf/contrib/robin_hood.hpp>
#include <hibf/layout/compute_fpr_correction.hpp>
#include <hibf/layout/graph.hpp>
#include <hibf/sketch/hyperloglog.hpp>
#include "compute_ibf_size.hpp"
#include "shared.hpp"

Classes
struct	ibf_stats

struct	per_level_stats

Functions
void	compute_kmers (robin_hood::unordered_flat_set< uint64_t > &kmers, seqan::hibf::build::build_data const &data, seqan::hibf::layout::layout::user_bin const &record)

size_t	hierarchical_stats (std::vector< ibf_stats > &stats, robin_hood::unordered_flat_set< uint64_t > &parent_kmers, seqan::hibf::layout::graph::node const &current_node, seqan::hibf::build::build_data &data, size_t const current_hibf_level)

size_t	hierarchical_stats (std::vector< ibf_stats > &stats, seqan::hibf::layout::graph::node const &root_node, seqan::hibf::build::build_data &data)

void	execute_general_stats (config const &cfg)

void	execute_sizes (config const &cfg)

Function Documentation

◆ compute_kmers()

void compute_kmers	(	robin_hood::unordered_flat_set< uint64_t > &	kmers,
		seqan::hibf::build::build_data const &	data,
		seqan::hibf::layout::layout::user_bin const &	record
	)

◆ execute_general_stats()

void execute_general_stats ( config const & cfg )

◆ execute_sizes()

void execute_sizes ( config const & cfg )

◆ hierarchical_stats() [1/2]

size_t hierarchical_stats	(	std::vector< ibf_stats > &	stats,
		robin_hood::unordered_flat_set< uint64_t > &	parent_kmers,
		seqan::hibf::layout::graph::node const &	current_node,
		seqan::hibf::build::build_data &	data,
		size_t const	current_hibf_level
	)

◆ hierarchical_stats() [2/2]

size_t hierarchical_stats	(	std::vector< ibf_stats > &	stats,
		seqan::hibf::layout::graph::node const &	root_node,
		seqan::hibf::build::build_data &	data
	)