HIBF 1.0.0-rc.1
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Sketching

Includes API to compute HyperLoglog sketches for the cardinality/size estimates for the layout algorithm. More...

Topics

 Toolbox
 Algorithms for union estimation and similarity rearrangement executed before computing the layout.
 

Classes

class  seqan::hibf::sketch::hyperloglog
 HyperLogLog estimates. More...
 

Functions

void seqan::hibf::sketch::estimate_kmer_counts (std::vector< seqan::hibf::sketch::hyperloglog > const &sketches, std::vector< size_t > &kmer_counts)
 Estimates k-mer counts via sketches.
 

Detailed Description

Includes API to compute HyperLoglog sketches for the cardinality/size estimates for the layout algorithm.