|
|
compatible (seqan3) |
gap_score (seqan3) |
pod_tuple< type0 > (seqan3) |
standard_layout (seqan3) |
| concatenated_sequences (seqan3) |
|
pod_tuple< type0, types... > (seqan3) |
static_band (seqan3) |
| aa10li (seqan3) |
configuration (seqan3) |
predicate (std) |
strata (seqan3::search_cfg) |
| aa10murphy (seqan3) |
const_iterable_range (seqan3) |
hash< alphabet_t > (std) |
alignment_file_header::program_info_t (seqan3) |
stream_REMOVEME (seqan3) |
| aa20 (seqan3) |
const_reference (seqan3) |
hash< seqan3::dynamic_bitset< cap > > (std) |
pseudo_random_access_iterator (seqan3) |
strict_weak_order (std) |
| aa27 (seqan3) |
const_reference< rng_t > (seqan3) |
hash< urng_t > (std) |
pseudo_random_access_range (seqan3) |
structure_file_input (seqan3) |
| aligned_allocator (seqan3) |
constructible_from (std) |
|
|
structure_file_input_default_traits_aa (seqan3) |
| aligned_ends (seqan3::align_cfg) |
container (seqan3) |
structure_file_input_default_traits_rna (seqan3) |
| aligned_sequence (seqan3) |
convertible_to (std) |
implicitly_convertible_to (seqan3) |
qualified (seqan3) |
structure_file_input_format (seqan3) |
| alignment_coordinate (seqan3) |
copy_constructible (std) |
innermost_value_type (seqan3) |
quality_alphabet (seqan3) |
structure_file_input_options (seqan3) |
| alignment_file_header (seqan3) |
copyable (std) |
input_directory_validator (seqan3) |
quality_base (seqan3) |
structure_file_input_traits (seqan3) |
| alignment_file_input (seqan3) |
|
input_file_validator (seqan3) |
|
structure_file_output (seqan3) |
| alignment_file_input_default_traits (seqan3) |
input_stream_over (seqan3) |
structure_file_output_format (seqan3) |
| alignment_file_input_format (seqan3) |
debug_stream_type (seqan3) |
insertion (seqan3::search_cfg) |
random_access_container (seqan3) |
structure_file_output_options (seqan3) |
| alignment_file_input_options (seqan3) |
deep (seqan3::views) |
integral (std) |
aligned_allocator::rebind (seqan3) |
structured_aa (seqan3) |
| alignment_file_input_traits (seqan3) |
default_constructible (std) |
invalid_alignment_configuration (seqan3) |
record (seqan3) |
structured_rna (seqan3) |
| alignment_file_output (seqan3) |
deletion (seqan3::search_cfg) |
invalid_char_assignment (seqan3) |
ref_info_not_given (seqan3) |
substitution (seqan3::search_cfg) |
| alignment_file_output_format (seqan3) |
derived_from (std) |
invocable (std) |
reference (seqan3) |
swappable (std) |
| alignment_file_output_options (seqan3) |
destructible (std) |
io_error (seqan3) |
reference< it_t > (seqan3) |
swappable_with (std) |
| alignment_range (seqan3) |
difference_type (seqan3) |
is_constexpr_default_constructible (seqan3) |
reference< rng_t > (seqan3) |
|
| alignment_range::alignment_range_iterator (seqan3) |
difference_type< it_t > (seqan3) |
is_constexpr_default_constructible< t > (seqan3) |
regex_validator (seqan3) |
| alignment_result (seqan3) |
difference_type< rng_t > (seqan3) |
is_execution_policy (seqan3) |
regular (std) |
to_chars_result (std) |
| alphabet (seqan3::custom) |
dna15 (seqan3) |
iterator_tag (seqan3) |
regular_invocable (std) |
too_few_arguments (seqan3) |
| alphabet (seqan3) |
dna3bs (seqan3) |
|
relation (std) |
too_many_arguments (seqan3) |
| alphabet< char_type > (seqan3::custom) |
dna4 (seqan3) |
remove_rvalue_reference (seqan3) |
total (seqan3::search_cfg) |
| alphabet< uint_type > (seqan3::custom) |
dna5 (seqan3) |
lower_bound (seqan3) |
required_option_missing (seqan3) |
totally_ordered (std) |
| alphabet_base (seqan3) |
dot_bracket3 (seqan3) |
|
reservible_container (seqan3) |
totally_ordered_with (std) |
| alphabet_base< derived_type, 1ul, char_t > (seqan3) |
dssp9 (seqan3) |
result (seqan3::align_cfg) |
transformation_trait (seqan3) |
| alphabet_proxy (seqan3) |
dynamic_bitset (seqan3) |
mask (seqan3) |
rna15 (seqan3) |
trivial (seqan3) |
| alphabet_tuple_base (seqan3) |
|
masked (seqan3) |
rna4 (seqan3) |
trivially_copyable (seqan3) |
| alphabet_variant (seqan3) |
match_score (seqan3) |
rna5 (seqan3) |
trivially_destructible (seqan3) |
| aminoacid_alphabet (seqan3) |
end_gaps (seqan3) |
max_error (seqan3::search_cfg) |
rna_structure_alphabet (seqan3) |
tuple_element< elem_no, seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std) |
| aminoacid_base (seqan3) |
equality_comparable (std) |
max_error (seqan3::align_cfg) |
rvalue_reference (seqan3) |
tuple_element< elem_no, seqan3::record< field_types, field_ids > > (std) |
| aminoacid_empty_base (seqan3) |
equality_comparable_with (std) |
max_error_rate (seqan3::search_cfg) |
rvalue_reference< it_t > (seqan3) |
tuple_element< i, tuple_t > (std) |
| aminoacid_scoring_scheme (seqan3) |
explicitly_convertible_to (seqan3) |
mismatch_score (seqan3) |
rvalue_reference< rng_t > (seqan3) |
tuple_like (seqan3) |
| argument_parser (seqan3) |
|
mode (seqan3::search_cfg) |
|
tuple_size< seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats > > (std) |
| argument_parser_compatible_option (seqan3) |
mode (seqan3::align_cfg) |
tuple_size< seqan3::record< field_types, field_ids > > (std) |
| argument_parser_meta_data (seqan3) |
fields (seqan3) |
movable (std) |
sam_dna16 (seqan3) |
tuple_size< tuple_t > (std) |
| argument_parsing (seqan3::custom) |
file_open_error (seqan3) |
move_constructible (std) |
sam_tag_dictionary (seqan3) |
type_conversion_failed (seqan3) |
| arithmetic (seqan3) |
file_validator_base (seqan3) |
|
sam_tag_type (seqan3) |
|
| arithmetic_range_validator (seqan3) |
floating_point (seqan3) |
same_as (std) |
| assignable_from (std) |
fm_index (seqan3) |
named_enumeration (seqan3) |
scoring (seqan3::align_cfg) |
unary_type_trait (seqan3) |
|
|
fm_index_cursor (seqan3) |
nucleotide_alphabet (seqan3) |
scoring_scheme (seqan3) |
unexpected_end_of_input (seqan3) |
| fm_index_cursor_specialisation (seqan3) |
nucleotide_base (seqan3) |
scoring_scheme_base (seqan3) |
ungapped (seqan3) |
| back_end_first (seqan3) |
fm_index_specialisation (seqan3) |
nucleotide_scoring_scheme (seqan3) |
semialphabet (seqan3) |
unhandled_extension_error (seqan3) |
| back_end_second (seqan3) |
format_bam (seqan3) |
|
semialphabet_any (seqan3) |
unknown_option (seqan3) |
| band (seqan3::align_cfg) |
format_embl (seqan3) |
semiregular (std) |
unsequenced_policy (seqan3) |
| bi_fm_index (seqan3) |
format_error (seqan3) |
option_declared_multiple_times (seqan3) |
sequence_container (seqan3) |
unsigned_integral (std) |
| bi_fm_index_cursor (seqan3) |
format_fasta (seqan3) |
output (seqan3::search_cfg) |
sequence_end_gap_specifier_base (seqan3) |
upper_bound (seqan3) |
| bi_fm_index_cursor_specialisation (seqan3) |
format_fastq (seqan3) |
output_directory_validator (seqan3) |
sequence_file_input (seqan3) |
|
| bi_fm_index_specialisation (seqan3) |
format_genbank (seqan3) |
output_file_validator (seqan3) |
sequence_file_input_default_traits_aa (seqan3) |
| bin_literal (seqan3) |
format_sam (seqan3) |
output_stream_over (seqan3) |
sequence_file_input_default_traits_dna (seqan3) |
validation_failed (seqan3) |
| bitcompressed_vector (seqan3) |
format_vienna (seqan3) |
overflow_error_on_conversion (seqan3) |
sequence_file_input_format (seqan3) |
validator (seqan3) |
| boolean (std) |
forwarding_range (seqan3) |
|
sequence_file_input_options (seqan3) |
value_list_validator (seqan3) |
| builtin_character (seqan3) |
from_chars_result (std) |
sequence_file_input_traits (seqan3) |
value_type (seqan3) |
|
|
front_end_first (seqan3) |
parallel_policy (seqan3) |
sequence_file_output (seqan3) |
value_type< it_t > (seqan3) |
| front_end_second (seqan3) |
parallel_unsequenced_policy (seqan3) |
sequence_file_output_format (seqan3) |
value_type< rng_t > (seqan3) |
| cereal_archive (seqan3) |
|
parse_error (seqan3) |
sequence_file_output_options (seqan3) |
|
| cereal_input_archive (seqan3) |
parser_design_error (seqan3) |
sequenced_policy (seqan3) |
| cereal_output_archive (seqan3) |
gap (seqan3) |
parser_invalid_argument (seqan3) |
shape (seqan3) |
weakly_assignable_from (seqan3) |
| cereal_text_archive (seqan3) |
gap (seqan3::align_cfg) |
phred42 (seqan3) |
signed_integral (std) |
writable_alphabet (seqan3) |
| cerealisable (seqan3) |
gap_decorator (seqan3) |
phred63 (seqan3) |
size_type (seqan3) |
writable_quality_alphabet (seqan3) |
| cigar (seqan3) |
gap_decorator::gap_decorator_iterator (seqan3) |
phred68legacy (seqan3) |
size_type< it_t > (seqan3) |
writable_semialphabet (seqan3) |
| cigar_op (seqan3) |
gap_erase_failure (seqan3) |
pipeable_config_element (seqan3) |
size_type< rng_t > (seqan3) |
wuss (seqan3) |
| common_reference_with (std) |
gap_open_score (seqan3) |
plain_byte_alphabet (sdsl) |
small_string (seqan3) |
|
| common_with (std) |
gap_scheme (seqan3) |
pod_tuple (seqan3) |
small_vector (seqan3) |
|
| | | | |
1.8.16