seqan3::align_cfg::output_sequence2_id Class Reference

Configures the alignment result to output the id of the second sequence. More...

#include <seqan3/alignment/configuration/align_config_output.hpp>

Inheritance diagram for seqan3::align_cfg::output_sequence2_id:

Public Member Functions
Constructor, destructor and assignment
constexpr	output_sequence2_id ()=default
	Defaulted.
constexpr	output_sequence2_id (output_sequence2_id const &)=default
	Defaulted.
constexpr	output_sequence2_id (output_sequence2_id &&)=default
	Defaulted.
constexpr output_sequence2_id &	operator= (output_sequence2_id const &)=default
	Defaulted.
constexpr output_sequence2_id &	operator= (output_sequence2_id &&)=default
	Defaulted.
	~output_sequence2_id ()=default
	Defaulted.

Detailed Description

Configures the alignment result to output the id of the second sequence.

This option forces the alignment to output the id of the second sequence.

If this option is not set in the alignment configuration, accessing the id of the second sequence via the seqan3::alignment_result object is forbidden and will lead to a compile time error.

Example

// SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: CC0-1.0
 
#include <seqan3/alignment/configuration/align_config_output.hpp>
 
int main()
{
    // Output only the id of the second sequence.
    seqan3::configuration cfg = seqan3::align_cfg::output_sequence2_id{};
}

See also

seqan3::align_cfg::output_score

seqan3::align_cfg::output_end_position

seqan3::align_cfg::output_begin_position

seqan3::align_cfg::output_alignment

seqan3::align_cfg::output_sequence1_id

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The documentation for this class was generated from the following file:

• align_config_output.hpp