affine_cell_type typedef | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
affine_score_tuple_t typedef | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
base_t typedef | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
compute_inner_cell(score_type diagonal_score, affine_cell_t previous_cell, score_type const sequence_score) const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
first_column_is_free | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
first_row_is_free | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
gap_extension_score | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
gap_open_score | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
initialise_band_first_cell(score_type diagonal_score, affine_cell_t previous_cell, score_type const sequence_score) const noexcept | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | inlineprotected |
initialise_first_column_cell(affine_cell_t previous_cell) const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
initialise_first_row_cell(affine_cell_t previous_cell) const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
initialise_origin_cell() const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
lowest_viable_score() const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
maybe_convert_to_simd(score_t &&score) const noexcept | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineprotected |
operator=(policy_affine_gap_recursion_banded const &)=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
operator=(policy_affine_gap_recursion_banded &&)=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
seqan3::detail::policy_affine_gap_recursion::operator=(policy_affine_gap_recursion const &)=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
seqan3::detail::policy_affine_gap_recursion::operator=(policy_affine_gap_recursion &&)=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
original_score_type typedef | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
policy_affine_gap_recursion()=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
policy_affine_gap_recursion(policy_affine_gap_recursion const &)=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
policy_affine_gap_recursion(policy_affine_gap_recursion &&)=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
policy_affine_gap_recursion(alignment_configuration_t const &config) | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | inlineexplicitprotected |
policy_affine_gap_recursion_banded()=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
policy_affine_gap_recursion_banded(policy_affine_gap_recursion_banded const &)=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
policy_affine_gap_recursion_banded(policy_affine_gap_recursion_banded &&)=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
policy_affine_gap_recursion_banded(alignment_configuration_t const &config) | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | inlineexplicitprotected |
score_type typedef | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
traits_type typedef | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |
~policy_affine_gap_recursion()=default | seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t > | protected |
~policy_affine_gap_recursion_banded()=default | seqan3::detail::policy_affine_gap_recursion_banded< alignment_configuration_t > | protected |