Here is a list of all documented variables with links to the class documentation for each member:
- r -
- r_left : seqan3::detail::alignment_score_matrix_proxy< score_type >, seqan3::detail::alignment_trace_matrix_proxy< coordinate_type, trace_type >
- range_base_t : seqan3::detail::alignment_score_matrix_one_column< score_t >, seqan3::detail::alignment_score_matrix_one_column_banded< score_t >, seqan3::detail::alignment_trace_matrix_full< trace_t, coordinate_only >, seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only >
- range_ptr : seqan3::algorithm_result_generator_range< algorithm_executor_type >::algorithm_range_iterator
- range_value_t_is_compatible_with_value_type : seqan3::concatenated_sequences< underlying_container_type, data_delimiters_type >
- rank : seqan3::alphabet_base< derived_type, size, char_t >
- rank_complement_table : seqan3::dna15, seqan3::dna16sam, seqan3::dna3bs, seqan3::dna4, seqan3::dna5
- rank_to_char : seqan3::masked< sequence_alphabet_t >
- rank_to_char_table : seqan3::aa10li, seqan3::aa10murphy, seqan3::aa20, seqan3::aa27, seqan3::alphabet_variant< alternative_types >, seqan3::dna15, seqan3::dna16sam, seqan3::dna3bs, seqan3::dna4, seqan3::dna5, seqan3::dot_bracket3, seqan3::dssp9, seqan3::exposition_only::cigar_operation, seqan3::qualified< sequence_alphabet_t, quality_alphabet_t >, seqan3::rna15, seqan3::rna4, seqan3::rna5, seqan3::wuss< SIZE >
- rank_to_phred : seqan3::phred_base< derived_type, size >, seqan3::qualified< sequence_alphabet_t, quality_alphabet_t >
- raw_record : seqan3::format_sam
- rb : seqan3::detail::fm_index_cursor_node< index_t >
- read_groups : seqan3::sam_file_header< ref_ids_type >
- reader_latch : seqan3::detail::reader_writer_manager
- record_buffer : seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >, seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_ >, seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- ref : seqan3::detail::alignment_matrix_column_major_range_base< derived_t >::alignment_column_type
- ref_dict : seqan3::sam_file_header< ref_ids_type >
- ref_id_info : seqan3::sam_file_header< ref_ids_type >
- ref_info_present_in_header : seqan3::detail::format_sam_base
- reference_begin_position_ : seqan3::search_result< query_id_type, cursor_type, reference_id_type, reference_begin_position_type >
- reference_id_ : seqan3::search_result< query_id_type, cursor_type, reference_id_type, reference_begin_position_type >
- reference_ids : seqan3::sam_file_header< ref_ids_type >
- reference_sequences_ptr : seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- refID : seqan3::format_bam::alignment_record_core
- requires_trace_information : seqan3::detail::alignment_configuration_traits< configuration_t >
- resource : seqan3::detail::algorithm_executor_blocking< resource_t, algorithm_t, algorithm_result_t, execution_handler_t >
- resource_it : seqan3::detail::algorithm_executor_blocking< resource_t, algorithm_t, algorithm_result_t, execution_handler_t >
- result_buffer : seqan3::interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >, seqan3::interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
- rev_fm : seqan3::bi_fm_index< alphabet_t, text_layout_mode_, sdsl_index_type_ >
- rev_lb : seqan3::bi_fm_index_cursor< index_t >
- rev_rb : seqan3::bi_fm_index_cursor< index_t >
- rightColumnTab : seqan3::detail::format_help::console_layout_struct
- rightColumnWidth : seqan3::detail::format_help::console_layout_struct
- rightPadding : seqan3::detail::format_help::console_layout_struct
- rna15 : seqan3::dna15
- rna4 : seqan3::dna4
- rna5 : seqan3::dna5
- roll_factor : seqan3::detail::kmer_hash_view< urng_t >::basic_iterator< const_range >
- row : seqan3::detail::matrix_index< index_t >
- row_col_sep : seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >::format_type
- row_count : seqan3::detail::coordinate_matrix< index_t >::iterator, seqan3::detail::coordinate_matrix< index_t >, seqan3::detail::trace_matrix_full< trace_t >
- row_dim : seqan3::detail::two_dimensional_matrix< value_t, allocator_t, order >
- row_index : seqan3::detail::alignment_optimum< score_t >
- row_sep : seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >::format_type
- rows_size : seqan3::detail::edit_distance_score_matrix_full< word_t, score_t, is_semi_global, use_max_errors >, seqan3::detail::edit_distance_trace_matrix_full< word_t, is_semi_global, use_max_errors >