Here is a list of all documented class members with links to the class documentation for each member:
- m -
- magic_header : seqan3::detail::bgzf_compression, seqan3::detail::bz2_compression, seqan3::detail::gz_compression, seqan3::detail::zstd_compression
- make_algorithm() : seqan3::detail::alignment_configurator
- make_alignment_result() : seqan3::detail::alignment_algorithm< config_t, algorithm_policies_t >
- make_proxy() : seqan3::detail::alignment_matrix_column_major_range_base< derived_t >, seqan3::detail::alignment_score_matrix_one_column< score_t >, seqan3::detail::alignment_score_matrix_one_column_banded< score_t >, seqan3::detail::alignment_trace_matrix_full< trace_t, coordinate_only >, seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only >
- make_result_and_invoke() : seqan3::detail::policy_alignment_result_builder< alignment_configuration_t >
- make_results() : seqan3::detail::policy_search_result_builder< search_configuration_t >
- make_results_impl() : seqan3::detail::policy_search_result_builder< search_configuration_t >
- make_score_profile() : seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t >, seqan3::detail::simd_matrix_scoring_scheme< simd_score_t, alphabet_t, alignment_t >
- man_page_section : seqan3::argument_parser_meta_data
- man_page_title : seqan3::argument_parser_meta_data
- manager : seqan3::detail::reader_writer_manager::scoped_reader_type, seqan3::detail::reader_writer_manager::scoped_writer_type
- mapping_quality() : seqan3::sam_record< field_types, field_ids >
- mapq : seqan3::format_bam::alignment_record_core
- mapq_type : seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- mask : seqan3::dynamic_bitset< bit_capacity >::reference_proxy_type, seqan3::mask
- mask_matrix() : seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >
- mask_type : seqan3::simd::simd_traits< simd_t >, seqan3::simd::simd_traits< builtin_simd_t >
- masked : seqan3::mask, seqan3::masked< sequence_alphabet_t >
- match_score : seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t >, seqan3::match_score< score_type >
- mate_position() : seqan3::sam_record< field_types, field_ids >
- mate_reference_id() : seqan3::sam_record< field_types, field_ids >
- mate_type : seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- matrix : seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
- matrix_base_t : seqan3::detail::alignment_score_matrix_one_column< score_t >, seqan3::detail::alignment_score_matrix_one_column_banded< score_t >, seqan3::detail::alignment_trace_matrix_full< trace_t, coordinate_only >, seqan3::detail::alignment_trace_matrix_full_banded< trace_t, coordinate_only >
- matrix_column_t : seqan3::detail::score_matrix_single_column< score_t >::matrix_iterator
- matrix_column_type : seqan3::detail::trace_matrix_full< trace_t >::iterator
- matrix_column_value_t : seqan3::detail::trace_matrix_full< trace_t >::iterator
- matrix_coordinate : seqan3::detail::matrix_index< index_t >
- matrix_coordinate_type : seqan3::detail::alignment_configuration_traits< configuration_t >, seqan3::detail::policy_optimum_tracker< alignment_configuration_t, optimum_updater_t >
- matrix_index() : seqan3::detail::matrix_index< index_t >
- matrix_index_type : seqan3::detail::alignment_configuration_traits< configuration_t >, seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t >
- matrix_iter : seqan3::detail::trace_iterator_base< derived_t, matrix_iter_t >
- matrix_iterator() : seqan3::detail::score_matrix_single_column< score_t >::matrix_iterator
- matrix_ptr : seqan3::detail::two_dimensional_matrix< value_t, allocator_t, order >::basic_iterator< const_range >
- matrix_size : seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
- matrix_size_type : seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
- matrix_t : seqan3::detail::trace_matrix_full< trace_t >
- matrix_type : seqan3::aminoacid_scoring_scheme< score_type >, seqan3::nucleotide_scoring_scheme< score_type >, seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
- max : seqan3::arithmetic_range_validator< option_value_t >
- max_error_counts() : seqan3::detail::policy_max_error
- max_error_deletion() : seqan3::search_cfg::max_error_deletion
- max_error_insertion() : seqan3::search_cfg::max_error_insertion
- max_error_substitution() : seqan3::search_cfg::max_error_substitution
- max_error_total() : seqan3::search_cfg::max_error_total
- max_errors : seqan3::detail::edit_distance_unbanded_max_errors_policy< derived_t, edit_traits >
- max_errors_init() : seqan3::detail::edit_distance_unbanded_max_errors_policy< derived_t, edit_traits >
- max_length : seqan3::simd::simd_traits< simd_t >, seqan3::simd::simd_traits< builtin_simd_t >
- max_pos : seqan3::detail::view_take_exactly< urng_t, or_throw >::basic_iterator< const_range >
- max_pseudoknot_depth : seqan3::dot_bracket3, seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >, seqan3::wuss< SIZE >
- max_repetitions : seqan3::detail::spin_delay
- max_rows : seqan3::detail::edit_distance_score_matrix_full< word_t, score_t, is_semi_global, use_max_errors >::max_errors_state, seqan3::detail::edit_distance_score_matrix_full< word_t, score_t, is_semi_global, use_max_errors >, seqan3::detail::edit_distance_trace_matrix_full< word_t, is_semi_global, use_max_errors >::max_errors_state, seqan3::detail::edit_distance_unbanded_max_errors_policy< derived_t, edit_traits >
- max_shape_count : seqan3::detail::kmer_hash_view< urng_t >
- max_simd_type : seqan3::detail::view_to_simd< urng_t, simd_t >
- max_size() : seqan3::bitpacked_sequence< alphabet_type >, seqan3::concatenated_sequences< underlying_container_type, data_delimiters_type >, seqan3::dynamic_bitset< bit_capacity >, seqan3::small_string< capacity_ >, seqan3::small_vector< value_type_, capacity_ >
- max_size_in_collection : seqan3::detail::alignment_algorithm< config_t, algorithm_policies_t >
- maximalScreenWidth : seqan3::detail::format_help::console_layout_struct
- maybe_close_list() : seqan3::detail::format_html
- maybe_close_paragraph() : seqan3::detail::format_html
- maybe_const_target_t : seqan3::detail::transfer_type_modifier_onto< source_t, target_t >
- maybe_convert_to_simd() : seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >
- maybe_default_output() : seqan3::detail::alignment_configurator
- maybe_lvalue_reference_target_t : seqan3::detail::transfer_type_modifier_onto< source_t, target_t >
- maybe_rvalue_reference_t : seqan3::detail::transfer_type_modifier_onto< source_t, target_t >
- me_ptr : seqan3::detail::alignment_matrix_column_major_range_base< derived_t >::alignment_column_type, seqan3::detail::alignment_matrix_column_major_range_base< derived_t >::iterator_type
- member : seqan3::detail::inherited_iterator_base< derived_t, base_t >
- membership_agent : seqan3::interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >, seqan3::interleaved_bloom_filter< data_layout_mode_ >
- membership_agent_type() : seqan3::interleaved_bloom_filter< data_layout_mode_ >::membership_agent_type
- message() : seqan3::detail::char_predicate_base< derived_t >
- message_app_update : seqan3::detail::version_checker
- message_registered_app_update : seqan3::detail::version_checker
- message_seqan3_update : seqan3::detail::version_checker
- message_unregistered_app : seqan3::detail::version_checker
- meta : seqan3::detail::format_help_base< derived_type >
- method_global() : seqan3::align_cfg::method_global
- method_local() : seqan3::align_cfg::method_local
- min : seqan3::arithmetic_range_validator< option_value_t >
- min_score() : seqan3::align_cfg::min_score
- minimalScreenWidth : seqan3::detail::format_help::console_layout_struct
- minimiser_position_offset : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- minimiser_value : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- minimiser_view() : seqan3::detail::minimiser_view< urng1_t, urng2_t >
- mismatch_score : seqan3::detail::simd_match_mismatch_scoring_scheme< simd_score_t, alphabet_t, alignment_t >, seqan3::mismatch_score< score_type >
- mode : seqan3::output_file_validator< file_t >
- move_initialise() : seqan3::detail::algorithm_executor_blocking< resource_t, algorithm_t, algorithm_result_t, execution_handler_t >
- msg() : char_predicate, seqan3::detail::char_predicate_disjunction< condition_ts >, seqan3::detail::char_predicate_negator< condition_t >, seqan3::detail::is_char_type< char_v >, seqan3::detail::is_in_interval_type< interval_first, interval_last >
- multiple_frame_error : seqan3::detail::view_translate_single< urng_t >