Here is a list of all documented class members with links to the class documentation for each member:
- u -
- U : seqan3::detail::edit_distance_trace_matrix_full< word_t, is_semi_global, use_max_errors >::trace_path_iterator
- u : seqan3::detail::search< nbr_blocks >, seqan3::detail::search_dyn
- u_range : seqan3::detail::pairwise_combine_view< underlying_range_type >
- unaligned_sequence_type : seqan3::detail::make_aligned_sequence_type< range_t >, seqan3::gap_decorator< inner_type >
- underflow() : seqan3::detail::view_to_simd< urng_t, simd_t >::iterator_type
- underlying_iterator_t : seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >::basic_consume_iterator< const_range >
- underlying_iterator_type : seqan3::detail::pairwise_combine_view< underlying_range_type >::basic_iterator< range_type >
- underlying_ref_t : seqan3::detail::pairwise_combine_view< underlying_range_type >::basic_iterator< range_type >
- underlying_sentinel : seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >::basic_consume_iterator< const_range >, seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >::basic_sentinel< const_range >
- underlying_sentinel_t : seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >::basic_consume_iterator< const_range >, seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >::basic_sentinel< const_range >
- underlying_type : seqan3::detail::alignment_score_matrix_one_column< score_t >, seqan3::detail::alignment_score_matrix_one_column_banded< score_t >, seqan3::detail::alignment_score_matrix_one_column_base< score_t >
- underlying_val_t : seqan3::detail::pairwise_combine_view< underlying_range_type >::basic_iterator< range_type >
- unexpected_end_of_input() : seqan3::unexpected_end_of_input
- ungapped_view : seqan3::gap_decorator< inner_type >
- ungapped_view_pos : seqan3::gap_decorator< inner_type >::basic_iterator< bool >
- ungapped_view_type : seqan3::gap_decorator< inner_type >
- unhandled_extension_error() : seqan3::unhandled_extension_error
- unicode : seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >, seqan3::trace_directions_printer< detail::trace_directions >
- unicode_str_length() : seqan3::detail::debug_matrix< matrix_t, first_sequence_t, second_sequence_t >
- unidirectional_search_algorithm() : seqan3::detail::unidirectional_search_algorithm< configuration_t, index_t, policies_t >
- unknown_option() : seqan3::unknown_option
- unmasked : seqan3::mask
- unpack() : seqan3::detail::view_to_simd< urng_t, simd_t >::iterator_type
- unref_range_type : seqan3::detail::alignment_contract< range_type, alignment_config_type >
- unregistered_app : seqan3::detail::version_checker
- unsetf() : seqan3::debug_stream_type< char_t >
- up : seqan3::detail::alignment_score_matrix_proxy< score_type >, seqan3::detail::alignment_trace_matrix_proxy< coordinate_type, trace_type >, seqan3::detail::edit_distance_trace_matrix_full< word_t, is_semi_global, use_max_errors >::trace_matrix_state
- update() : seqan3::gap_decorator< inner_type >
- update_best_score() : seqan3::detail::edit_distance_unbanded_global_policy< derived_t, edit_traits >, seqan3::detail::edit_distance_unbanded_semi_global_policy< derived_t, edit_traits >
- update_final_chunk_position() : seqan3::detail::view_to_simd< urng_t, simd_t >::iterator_type
- update_if_new_optimal_score() : seqan3::detail::alignment_optimum< score_t >
- update_last_active_cell() : seqan3::detail::edit_distance_unbanded_max_errors_policy< derived_t, edit_traits >
- upper_diagonal : seqan3::align_cfg::band_fixed_size, seqan3::detail::policy_alignment_matrix< traits_t, alignment_matrix_t >
- urange : seqan3::detail::async_input_buffer_view< urng_t >::state, seqan3::detail::kmer_hash_view< urng_t >, seqan3::detail::view_interleave< urng_t, inserted_rng_t >, seqan3::detail::view_take_exactly< urng_t, or_throw >, seqan3::detail::view_take_until< urng_t, fun_t, or_throw, and_consume >, seqan3::detail::view_translate< urng_t >, seqan3::detail::view_translate_join< urng_t >, seqan3::detail::view_translate_single< urng_t >
- urange1 : seqan3::detail::minimiser_view< urng1_t, urng2_t >
- urange2 : seqan3::detail::minimiser_view< urng1_t, urng2_t >
- url : seqan3::argument_parser_meta_data
- urng : seqan3::detail::single_pass_input_view< urng_t >::state, seqan3::detail::view_enforce_random_access< urng_t >, seqan3::detail::view_to_simd< urng_t, simd_t >
- urng1_iterator : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng1_iterator_t : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng1_sentinel : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng1_sentinel_t : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng2_iterator : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng2_iterator_t : seqan3::detail::minimiser_view< urng1_t, urng2_t >::basic_iterator< const_range >
- urng_iterator_type : seqan3::detail::async_input_buffer_view< urng_t >, seqan3::detail::single_pass_input_view< urng_t >
- use_max_errors : seqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
- used_option_ids : seqan3::argument_parser
- user_input_error() : seqan3::user_input_error
- user_tags : seqan3::sam_file_header< ref_ids_type >, seqan3::sam_file_program_info_t